From 1e0a5d47c3574aeae656ba62836b9e7f53820ccb Mon Sep 17 00:00:00 2001 From: tpollina Date: Mon, 13 Jan 2020 11:21:59 +0100 Subject: [PATCH] Create MorphoCut_Installation.sh --- docs/MorphoCut_Installation.sh | 377 +++++++++++++++++++++++++++++++++ 1 file changed, 377 insertions(+) create mode 100644 docs/MorphoCut_Installation.sh diff --git a/docs/MorphoCut_Installation.sh b/docs/MorphoCut_Installation.sh new file mode 100644 index 0000000..aebdea6 --- /dev/null +++ b/docs/MorphoCut_Installation.sh @@ -0,0 +1,377 @@ + +######################################################### +Installation of MorphoCut development version: +######################################################### + +$ pip install -U git+https://github.com/morphocut/morphocut.git +Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple +Collecting git+https://github.com/morphocut/morphocut.git + Cloning https://github.com/morphocut/morphocut.git to /tmp/pip-req-build-NnGYk4 + Installing build dependencies ... error + Complete output from command /usr/bin/python -m pip install --ignore-installed --no-user --prefix /tmp/pip-build-env-e4DHrk --no-warn-script-location --no-binary :none: --only-binary :none: -i https://pypi.org/simple --extra-index-url https://www.piwheels.org/simple -- setuptools wheel: + Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple, https://www.piwheels.org/simple + Collecting setuptools + Downloading https://www.piwheels.org/simple/setuptools/setuptools-45.0.0-py2.py3-none-any.whl (583kB) + setuptools requires Python '>=3.5' but the running Python is 2.7.16 + + ---------------------------------------- +Command "/usr/bin/python -m pip install --ignore-installed --no-user --prefix /tmp/pip-build-env-e4DHrk --no-warn-script-location --no-binary :none: --only-binary :none: -i https://pypi.org/simple --extra-index-url https://www.piwheels.org/simple -- setuptools wheel" failed with error code 1 in None + +######################################################### +Test if MorphoCut is properly installed on Python3.7 +######################################################### + +$ python3.7 +Python 3.7.3 (default, Apr 3 2019, 05:39:12) +[GCC 8.2.0] on linux +Type "help", "copyright", "credits" or "license" for more information. +>>> from morphocut import Call, Pipeline +Traceback (most recent call last): + File "", line 1, in +ModuleNotFoundError: No module named 'morphocut' + +######################################################### +Installation of MorphoCut packaged on PyPI via pip +######################################################### + +$ pip install morphocut +Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple +Collecting morphocut + Could not find a version that satisfies the requirement morphocut (from versions: ) +No matching distribution found for morphocut + +######################################################### +Installation of MorphoCut packaged on PyPI via pip3 +######################################################### + +$ pip3 install morphocut +Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple +Collecting morphocut + Downloading https://files.pythonhosted.org/packages/7e/c7/1addaf867234dd30db6d1f4bf8d3b685d93b743023a863814451abd5cef8/morphocut-0.1.1-py3-none-any.whl +Collecting scikit-image>=0.16.0 (from morphocut) + Downloading https://www.piwheels.org/simple/scikit-image/scikit_image-0.16.2-cp37-cp37m-linux_armv7l.whl (39.7MB) + 100% |████████████████████████████████| 39.7MB 10kB/s +Collecting tqdm (from morphocut) + Downloading https://files.pythonhosted.org/packages/72/c9/7fc20feac72e79032a7c8138fd0d395dc6d8812b5b9edf53c3afd0b31017/tqdm-4.41.1-py2.py3-none-any.whl (56kB) + 100% |████████████████████████████████| 61kB 1.6MB/s +Collecting scipy (from morphocut) + Downloading https://files.pythonhosted.org/packages/04/ab/e2eb3e3f90b9363040a3d885ccc5c79fe20c5b8a3caa8fe3bf47ff653260/scipy-1.4.1.tar.gz (24.6MB) + 100% |████████████████████████████████| 24.6MB 17kB/s + Installing build dependencies ... done +Requirement already satisfied: numpy in /usr/lib/python3/dist-packages (from morphocut) (1.16.2) +Collecting pandas (from morphocut) + Downloading https://www.piwheels.org/simple/pandas/pandas-0.25.3-cp37-cp37m-linux_armv7l.whl (33.1MB) + 100% |████████████████████████████████| 33.1MB 12kB/s +Collecting PyWavelets>=0.4.0 (from scikit-image>=0.16.0->morphocut) + Downloading https://www.piwheels.org/simple/pywavelets/PyWavelets-1.1.1-cp37-cp37m-linux_armv7l.whl (6.1MB) + 100% |████████████████████████████████| 6.1MB 67kB/s +Collecting networkx>=2.0 (from scikit-image>=0.16.0->morphocut) + Downloading https://files.pythonhosted.org/packages/41/8f/dd6a8e85946def36e4f2c69c84219af0fa5e832b018c970e92f2ad337e45/networkx-2.4-py3-none-any.whl (1.6MB) + 100% |████████████████████████████████| 1.6MB 255kB/s +Requirement already satisfied: pillow>=4.3.0 in /usr/lib/python3/dist-packages (from scikit-image>=0.16.0->morphocut) (5.4.1) +Collecting imageio>=2.3.0 (from scikit-image>=0.16.0->morphocut) + Downloading https://files.pythonhosted.org/packages/1a/de/f7f985018f462ceeffada7f6e609919fbcc934acd9301929cba14bc2c24a/imageio-2.6.1-py3-none-any.whl (3.3MB) + 100% |████████████████████████████████| 3.3MB 123kB/s +Collecting python-dateutil>=2.6.1 (from pandas->morphocut) + Downloading https://files.pythonhosted.org/packages/d4/70/d60450c3dd48ef87586924207ae8907090de0b306af2bce5d134d78615cb/python_dateutil-2.8.1-py2.py3-none-any.whl (227kB) + 100% |████████████████████████████████| 235kB 822kB/s +Collecting pytz>=2017.2 (from pandas->morphocut) + Downloading https://files.pythonhosted.org/packages/e7/f9/f0b53f88060247251bf481fa6ea62cd0d25bf1b11a87888e53ce5b7c8ad2/pytz-2019.3-py2.py3-none-any.whl (509kB) + 100% |████████████████████████████████| 512kB 660kB/s +Collecting decorator>=4.3.0 (from networkx>=2.0->scikit-image>=0.16.0->morphocut) + Downloading https://files.pythonhosted.org/packages/8f/b7/f329cfdc75f3d28d12c65980e4469e2fa373f1953f5df6e370e84ea2e875/decorator-4.4.1-py2.py3-none-any.whl +Requirement already satisfied: six>=1.5 in /usr/lib/python3/dist-packages (from python-dateutil>=2.6.1->pandas->morphocut) (1.12.0) +Building wheels for collected packages: scipy + Running setup.py bdist_wheel for scipy ... error + Complete output from command /usr/bin/python3 -u -c "import setuptools, tokenize;__file__='/tmp/pip-install-vrivsnzz/scipy/setup.py';f=getattr(tokenize, 'open', open)(__file__);code=f.read().replace('\r\n', '\n');f.close();exec(compile(code, __file__, 'exec'))" bdist_wheel -d /tmp/pip-wheel-2w9xwni0 --python-tag cp37: + Traceback (most recent call last): + File "/tmp/pip-build-env-3v411zsn/lib/python3.7/site-packages/numpy/core/__init__.py", line 16, in + from . import multiarray + ImportError: libf77blas.so.3: cannot open shared object file: No such file or directory + + During handling of the above exception, another exception occurred: + + Traceback (most recent call last): + File "", line 1, in + File "/tmp/pip-install-vrivsnzz/scipy/setup.py", line 540, in + setup_package() + File "/tmp/pip-install-vrivsnzz/scipy/setup.py", line 516, in setup_package + from numpy.distutils.core import setup + File "/tmp/pip-build-env-3v411zsn/lib/python3.7/site-packages/numpy/__init__.py", line 142, in + from . import add_newdocs + File "/tmp/pip-build-env-3v411zsn/lib/python3.7/site-packages/numpy/add_newdocs.py", line 13, in + from numpy.lib import add_newdoc + File "/tmp/pip-build-env-3v411zsn/lib/python3.7/site-packages/numpy/lib/__init__.py", line 8, in + from .type_check import * + File "/tmp/pip-build-env-3v411zsn/lib/python3.7/site-packages/numpy/lib/type_check.py", line 11, in + import numpy.core.numeric as _nx + File "/tmp/pip-build-env-3v411zsn/lib/python3.7/site-packages/numpy/core/__init__.py", line 26, in + raise ImportError(msg) + ImportError: + Importing the multiarray numpy extension module failed. Most + likely you are trying to import a failed build of numpy. + If you're working with a numpy git repo, try `git clean -xdf` (removes all + files not under version control). Otherwise reinstall numpy. + + Original error was: libf77blas.so.3: cannot open shared object file: No such file or directory + + + ---------------------------------------- + Failed building wheel for scipy + Running setup.py clean for scipy + Complete output from command /usr/bin/python3 -u -c "import setuptools, tokenize;__file__='/tmp/pip-install-vrivsnzz/scipy/setup.py';f=getattr(tokenize, 'open', open)(__file__);code=f.read().replace('\r\n', '\n');f.close();exec(compile(code, __file__, 'exec'))" clean --all: + + `setup.py clean` is not supported, use one of the following instead: + + - `git clean -xdf` (cleans all files) + - `git clean -Xdf` (cleans all versioned files, doesn't touch + files that aren't checked into the git repo) + + Add `--force` to your command to use it anyway if you must (unsupported). + + + ---------------------------------------- + Failed cleaning build dir for scipy +Failed to build scipy +Installing collected packages: PyWavelets, decorator, networkx, imageio, scikit-image, tqdm, scipy, python-dateutil, pytz, pandas, morphocut + Running setup.py install for scipy ... error + Complete output from command /usr/bin/python3 -u -c "import setuptools, tokenize;__file__='/tmp/pip-install-vrivsnzz/scipy/setup.py';f=getattr(tokenize, 'open', open)(__file__);code=f.read().replace('\r\n', '\n');f.close();exec(compile(code, __file__, 'exec'))" install --record /tmp/pip-record-s4uxcq_l/install-record.txt --single-version-externally-managed --compile --user --prefix=: + + Note: if you need reliable uninstall behavior, then install + with pip instead of using `setup.py install`: + + - `pip install .` (from a git repo or downloaded source + release) + - `pip install scipy` (last SciPy release on PyPI) + + + Traceback (most recent call last): + File "/tmp/pip-build-env-3v411zsn/lib/python3.7/site-packages/numpy/core/__init__.py", line 16, in + from . import multiarray + ImportError: libf77blas.so.3: cannot open shared object file: No such file or directory + + During handling of the above exception, another exception occurred: + + Traceback (most recent call last): + File "", line 1, in + File "/tmp/pip-install-vrivsnzz/scipy/setup.py", line 540, in + setup_package() + File "/tmp/pip-install-vrivsnzz/scipy/setup.py", line 516, in setup_package + from numpy.distutils.core import setup + File "/tmp/pip-build-env-3v411zsn/lib/python3.7/site-packages/numpy/__init__.py", line 142, in + from . import add_newdocs + File "/tmp/pip-build-env-3v411zsn/lib/python3.7/site-packages/numpy/add_newdocs.py", line 13, in + from numpy.lib import add_newdoc + File "/tmp/pip-build-env-3v411zsn/lib/python3.7/site-packages/numpy/lib/__init__.py", line 8, in + from .type_check import * + File "/tmp/pip-build-env-3v411zsn/lib/python3.7/site-packages/numpy/lib/type_check.py", line 11, in + import numpy.core.numeric as _nx + File "/tmp/pip-build-env-3v411zsn/lib/python3.7/site-packages/numpy/core/__init__.py", line 26, in + raise ImportError(msg) + ImportError: + Importing the multiarray numpy extension module failed. Most + likely you are trying to import a failed build of numpy. + If you're working with a numpy git repo, try `git clean -xdf` (removes all + files not under version control). Otherwise reinstall numpy. + + Original error was: libf77blas.so.3: cannot open shared object file: No such file or directory + + + ---------------------------------------- +Command "/usr/bin/python3 -u -c "import setuptools, tokenize;__file__='/tmp/pip-install-vrivsnzz/scipy/setup.py';f=getattr(tokenize, 'open', open)(__file__);code=f.read().replace('\r\n', '\n');f.close();exec(compile(code, __file__, 'exec'))" install --record /tmp/pip-record-s4uxcq_l/install-record.txt --single-version-externally-managed --compile --user --prefix=" failed with error code 1 in /tmp/pip-install-vrivsnzz/scipy/ + +######################################################### +Installation of MorphoCut packaged on PyPI via pip3 using sudo +######################################################### + +$ sudo pip3 install morphocut +Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple +Collecting morphocut + Downloading https://files.pythonhosted.org/packages/7e/c7/1addaf867234dd30db6d1f4bf8d3b685d93b743023a863814451abd5cef8/morphocut-0.1.1-py3-none-any.whl +Collecting scikit-image>=0.16.0 (from morphocut) + Downloading https://www.piwheels.org/simple/scikit-image/scikit_image-0.16.2-cp37-cp37m-linux_armv7l.whl (39.7MB) + 100% |████████████████████████████████| 39.7MB 10kB/s +Collecting tqdm (from morphocut) + Downloading https://files.pythonhosted.org/packages/72/c9/7fc20feac72e79032a7c8138fd0d395dc6d8812b5b9edf53c3afd0b31017/tqdm-4.41.1-py2.py3-none-any.whl (56kB) + 100% |████████████████████████████████| 61kB 839kB/s +Requirement already satisfied: numpy in /usr/lib/python3/dist-packages (from morphocut) (1.16.2) +Collecting pandas (from morphocut) + Downloading https://www.piwheels.org/simple/pandas/pandas-0.25.3-cp37-cp37m-linux_armv7l.whl (33.1MB) + 100% |████████████████████████████████| 33.1MB 12kB/s +Collecting scipy (from morphocut) + Downloading https://files.pythonhosted.org/packages/04/ab/e2eb3e3f90b9363040a3d885ccc5c79fe20c5b8a3caa8fe3bf47ff653260/scipy-1.4.1.tar.gz (24.6MB) + 100% |████████████████████████████████| 24.6MB 17kB/s + Installing build dependencies ... done +Requirement already satisfied: pillow>=4.3.0 in /usr/lib/python3/dist-packages (from scikit-image>=0.16.0->morphocut) (5.4.1) +Collecting PyWavelets>=0.4.0 (from scikit-image>=0.16.0->morphocut) + Downloading https://www.piwheels.org/simple/pywavelets/PyWavelets-1.1.1-cp37-cp37m-linux_armv7l.whl (6.1MB) + 100% |████████████████████████████████| 6.1MB 51kB/s +Collecting networkx>=2.0 (from scikit-image>=0.16.0->morphocut) + Downloading https://files.pythonhosted.org/packages/41/8f/dd6a8e85946def36e4f2c69c84219af0fa5e832b018c970e92f2ad337e45/networkx-2.4-py3-none-any.whl (1.6MB) + 100% |████████████████████████████████| 1.6MB 247kB/s +Collecting imageio>=2.3.0 (from scikit-image>=0.16.0->morphocut) + Downloading https://files.pythonhosted.org/packages/1a/de/f7f985018f462ceeffada7f6e609919fbcc934acd9301929cba14bc2c24a/imageio-2.6.1-py3-none-any.whl (3.3MB) + 100% |████████████████████████████████| 3.3MB 123kB/s +Collecting pytz>=2017.2 (from pandas->morphocut) + Downloading https://files.pythonhosted.org/packages/e7/f9/f0b53f88060247251bf481fa6ea62cd0d25bf1b11a87888e53ce5b7c8ad2/pytz-2019.3-py2.py3-none-any.whl (509kB) + 100% |████████████████████████████████| 512kB 793kB/s +Collecting python-dateutil>=2.6.1 (from pandas->morphocut) + Downloading https://files.pythonhosted.org/packages/d4/70/d60450c3dd48ef87586924207ae8907090de0b306af2bce5d134d78615cb/python_dateutil-2.8.1-py2.py3-none-any.whl (227kB) + 100% |████████████████████████████████| 235kB 1.5MB/s +Collecting decorator>=4.3.0 (from networkx>=2.0->scikit-image>=0.16.0->morphocut) + Downloading https://files.pythonhosted.org/packages/8f/b7/f329cfdc75f3d28d12c65980e4469e2fa373f1953f5df6e370e84ea2e875/decorator-4.4.1-py2.py3-none-any.whl +Requirement already satisfied: six>=1.5 in /usr/lib/python3/dist-packages (from python-dateutil>=2.6.1->pandas->morphocut) (1.12.0) +Building wheels for collected packages: scipy + Running setup.py bdist_wheel for scipy ... error + Complete output from command /usr/bin/python3 -u -c "import setuptools, tokenize;__file__='/tmp/pip-install-ki6gsz87/scipy/setup.py';f=getattr(tokenize, 'open', open)(__file__);code=f.read().replace('\r\n', '\n');f.close();exec(compile(code, __file__, 'exec'))" bdist_wheel -d /tmp/pip-wheel-sfawkwpg --python-tag cp37: + Traceback (most recent call last): + File "/tmp/pip-build-env-p6ljhcs4/lib/python3.7/site-packages/numpy/core/__init__.py", line 16, in + from . import multiarray + ImportError: libf77blas.so.3: cannot open shared object file: No such file or directory + + During handling of the above exception, another exception occurred: + + Traceback (most recent call last): + File "", line 1, in + File "/tmp/pip-install-ki6gsz87/scipy/setup.py", line 540, in + setup_package() + File "/tmp/pip-install-ki6gsz87/scipy/setup.py", line 516, in setup_package + from numpy.distutils.core import setup + File "/tmp/pip-build-env-p6ljhcs4/lib/python3.7/site-packages/numpy/__init__.py", line 142, in + from . import add_newdocs + File "/tmp/pip-build-env-p6ljhcs4/lib/python3.7/site-packages/numpy/add_newdocs.py", line 13, in + from numpy.lib import add_newdoc + File "/tmp/pip-build-env-p6ljhcs4/lib/python3.7/site-packages/numpy/lib/__init__.py", line 8, in + from .type_check import * + File "/tmp/pip-build-env-p6ljhcs4/lib/python3.7/site-packages/numpy/lib/type_check.py", line 11, in + import numpy.core.numeric as _nx + File "/tmp/pip-build-env-p6ljhcs4/lib/python3.7/site-packages/numpy/core/__init__.py", line 26, in + raise ImportError(msg) + ImportError: + Importing the multiarray numpy extension module failed. Most + likely you are trying to import a failed build of numpy. + If you're working with a numpy git repo, try `git clean -xdf` (removes all + files not under version control). Otherwise reinstall numpy. + + Original error was: libf77blas.so.3: cannot open shared object file: No such file or directory + + + ---------------------------------------- + Failed building wheel for scipy + Running setup.py clean for scipy + Complete output from command /usr/bin/python3 -u -c "import setuptools, tokenize;__file__='/tmp/pip-install-ki6gsz87/scipy/setup.py';f=getattr(tokenize, 'open', open)(__file__);code=f.read().replace('\r\n', '\n');f.close();exec(compile(code, __file__, 'exec'))" clean --all: + + `setup.py clean` is not supported, use one of the following instead: + + - `git clean -xdf` (cleans all files) + - `git clean -Xdf` (cleans all versioned files, doesn't touch + files that aren't checked into the git repo) + + Add `--force` to your command to use it anyway if you must (unsupported). + + + ---------------------------------------- + Failed cleaning build dir for scipy +Failed to build scipy +Installing collected packages: PyWavelets, decorator, networkx, imageio, scikit-image, tqdm, pytz, python-dateutil, pandas, scipy, morphocut + Running setup.py install for scipy ... error + Complete output from command /usr/bin/python3 -u -c "import setuptools, tokenize;__file__='/tmp/pip-install-ki6gsz87/scipy/setup.py';f=getattr(tokenize, 'open', open)(__file__);code=f.read().replace('\r\n', '\n');f.close();exec(compile(code, __file__, 'exec'))" install --record /tmp/pip-record-hdghzezx/install-record.txt --single-version-externally-managed --compile: + + Note: if you need reliable uninstall behavior, then install + with pip instead of using `setup.py install`: + + - `pip install .` (from a git repo or downloaded source + release) + - `pip install scipy` (last SciPy release on PyPI) + + + Traceback (most recent call last): + File "/tmp/pip-build-env-p6ljhcs4/lib/python3.7/site-packages/numpy/core/__init__.py", line 16, in + from . import multiarray + ImportError: libf77blas.so.3: cannot open shared object file: No such file or directory + + During handling of the above exception, another exception occurred: + + Traceback (most recent call last): + File "", line 1, in + File "/tmp/pip-install-ki6gsz87/scipy/setup.py", line 540, in + setup_package() + File "/tmp/pip-install-ki6gsz87/scipy/setup.py", line 516, in setup_package + from numpy.distutils.core import setup + File "/tmp/pip-build-env-p6ljhcs4/lib/python3.7/site-packages/numpy/__init__.py", line 142, in + from . import add_newdocs + File "/tmp/pip-build-env-p6ljhcs4/lib/python3.7/site-packages/numpy/add_newdocs.py", line 13, in + from numpy.lib import add_newdoc + File "/tmp/pip-build-env-p6ljhcs4/lib/python3.7/site-packages/numpy/lib/__init__.py", line 8, in + from .type_check import * + File "/tmp/pip-build-env-p6ljhcs4/lib/python3.7/site-packages/numpy/lib/type_check.py", line 11, in + import numpy.core.numeric as _nx + File "/tmp/pip-build-env-p6ljhcs4/lib/python3.7/site-packages/numpy/core/__init__.py", line 26, in + raise ImportError(msg) + ImportError: + Importing the multiarray numpy extension module failed. Most + likely you are trying to import a failed build of numpy. + If you're working with a numpy git repo, try `git clean -xdf` (removes all + files not under version control). Otherwise reinstall numpy. + + Original error was: libf77blas.so.3: cannot open shared object file: No such file or directory + + + ---------------------------------------- +Command "/usr/bin/python3 -u -c "import setuptools, tokenize;__file__='/tmp/pip-install-ki6gsz87/scipy/setup.py';f=getattr(tokenize, 'open', open)(__file__);code=f.read().replace('\r\n', '\n');f.close();exec(compile(code, __file__, 'exec'))" install --record /tmp/pip-record-hdghzezx/install-record.txt --single-version-externally-managed --compile" failed with error code 1 in /tmp/pip-install-ki6gsz87/scipy/ + +######################################################### +Installation of Scipy using sudo apt-get +######################################################### + +$ sudo apt-get install python3-scipy +Lecture des listes de paquets... Fait +Construction de l'arbre des dépendances +Lecture des informations d'état... Fait +Les paquets supplémentaires suivants seront installés : + python3-decorator +Paquets suggérés : + python-scipy-doc +Les NOUVEAUX paquets suivants seront installés : + python3-decorator python3-scipy +0 mis à jour, 2 nouvellement installés, 0 à enlever et 41 non mis à jour. +Il est nécessaire de prendre 8 925 ko dans les archives. +Après cette opération, 38,0 Mo d'espace disque supplémentaires seront utilisés. +Souhaitez-vous continuer ? [O/n] o +Réception de :1 http://ftp.igh.cnrs.fr/pub/os/linux/raspbian/raspbian buster/main armhf python3-decorator all 4.3.0-1.1 [14,5 kB] +Réception de :2 http://ftp.igh.cnrs.fr/pub/os/linux/raspbian/raspbian buster/main armhf python3-scipy armhf 1.1.0-7 [8 910 kB] +8 925 ko réceptionnés en 3s (2 561 ko/s) +Sélection du paquet python3-decorator précédemment désélectionné. +(Lecture de la base de données... 99960 fichiers et répertoires déjà installés.) +Préparation du dépaquetage de .../python3-decorator_4.3.0-1.1_all.deb ... +Dépaquetage de python3-decorator (4.3.0-1.1) ... +Sélection du paquet python3-scipy précédemment désélectionné. +Préparation du dépaquetage de .../python3-scipy_1.1.0-7_armhf.deb ... +Dépaquetage de python3-scipy (1.1.0-7) ... +Paramétrage de python3-decorator (4.3.0-1.1) ... +Paramétrage de python3-scipy (1.1.0-7) ... + +######################################################### +Installation of MorphoCut packaged on PyPI via pip3 using sudo +######################################################### + +$ sudo pip3 install morphocut +Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple +Collecting morphocut + Using cached https://files.pythonhosted.org/packages/7e/c7/1addaf867234dd30db6d1f4bf8d3b685d93b743023a863814451abd5cef8/morphocut-0.1.1-py3-none-any.whl +Requirement already satisfied: scikit-image>=0.16.0 in /usr/local/lib/python3.7/dist-packages (from morphocut) (0.16.2) +Requirement already satisfied: numpy in /usr/lib/python3/dist-packages (from morphocut) (1.16.2) +Requirement already satisfied: tqdm in /usr/local/lib/python3.7/dist-packages (from morphocut) (4.41.1) +Requirement already satisfied: pandas in /usr/local/lib/python3.7/dist-packages (from morphocut) (0.25.3) +Requirement already satisfied: scipy in /usr/lib/python3/dist-packages (from morphocut) (1.1.0) +Requirement already satisfied: imageio>=2.3.0 in /usr/local/lib/python3.7/dist-packages (from scikit-image>=0.16.0->morphocut) (2.6.1) +Requirement already satisfied: PyWavelets>=0.4.0 in /usr/local/lib/python3.7/dist-packages (from scikit-image>=0.16.0->morphocut) (1.1.1) +Requirement already satisfied: networkx>=2.0 in /usr/local/lib/python3.7/dist-packages (from scikit-image>=0.16.0->morphocut) (2.4) +Requirement already satisfied: pillow>=4.3.0 in /usr/lib/python3/dist-packages (from scikit-image>=0.16.0->morphocut) (5.4.1) +Requirement already satisfied: python-dateutil>=2.6.1 in /usr/local/lib/python3.7/dist-packages (from pandas->morphocut) (2.8.1) +Requirement already satisfied: pytz>=2017.2 in /usr/local/lib/python3.7/dist-packages (from pandas->morphocut) (2019.3) +Requirement already satisfied: decorator>=4.3.0 in /usr/local/lib/python3.7/dist-packages (from networkx>=2.0->scikit-image>=0.16.0->morphocut) (4.4.1) +Requirement already satisfied: six>=1.5 in /usr/lib/python3/dist-packages (from python-dateutil>=2.6.1->pandas->morphocut) (1.12.0) +Installing collected packages: morphocut +Successfully installed morphocut-0.1.1 +