From 499c8bdefca679c248960e3383954dea099dec6d Mon Sep 17 00:00:00 2001 From: tpollina Date: Thu, 16 Jan 2020 16:15:51 +0100 Subject: [PATCH] Create MorphoCut_error.txt --- docs/MorphoCut_error.txt | 78 ++++++++++++++++++++++++++++++++++++++++ 1 file changed, 78 insertions(+) create mode 100644 docs/MorphoCut_error.txt diff --git a/docs/MorphoCut_error.txt b/docs/MorphoCut_error.txt new file mode 100644 index 0000000..cf6c47a --- /dev/null +++ b/docs/MorphoCut_error.txt @@ -0,0 +1,78 @@ + +######################################################### +######################################################### +USAGE ERROR +######################################################### +######################################################### + +Processing images under /home/pi/Desktop/PlanktonScope_acquisition/01_16_2020/15... +0it [00:00, ?it/s] +0it [00:00, ?it/s]Found 94 files in /home/pi/Desktop/PlanktonScope_acquisition/01_16_2020/15. + +Object 35_41_180124_84: : 85it [00:17, 5.95it/s] +Frame 35_41_180124: : 1it [00:17, 17.03s/it] +Object 35_41_763395_168: : 169it [00:24, 47.97it/s] +Frame 35_41_763395: : 2it [00:24, 14.11s/it] +Object 35_42_339153_245: : 245it [00:31, 44.73it/s] +Frame 35_42_339153: : 3it [00:31, 11.93s/it] +Object 35_42_899894_320: : 319it [00:38, 42.28it/s] +Frame 35_42_899894: : 4it [00:38, 10.44s/it] +Object 35_43_467613_394: : 394it [00:45, 44.59it/s] +Frame 35_43_467613: : 5it [00:44, 9.36s/it] +Object 35_44_040639_465: : 466it [00:56, 32.28it/s] +Frame 35_44_040639: : 6it [00:59, 9.95s/it] +Object 35_44_040639_465: : 466it [00:59, 7.78it/s] +Traceback (most recent call last): + File "/home/pi/Downloads/Morphocut.py", line 115, in + p.run() + File "/home/pi/.local/lib/python3.7/site-packages/morphocut/core.py", line 748, in run + for _ in self.transform_stream(): + File "/home/pi/.local/lib/python3.7/site-packages/morphocut/stream.py", line 68, in transform_stream + for obj in progress: + File "/home/pi/.local/lib/python3.7/site-packages/tqdm/std.py", line 1104, in __iter__ + for obj in iterable: + File "/home/pi/.local/lib/python3.7/site-packages/morphocut/core.py", line 489, in transform_stream + for obj in stream: + File "/home/pi/.local/lib/python3.7/site-packages/morphocut/contrib/ecotaxa.py", line 111, in transform_stream + for obj in stream: + File "/home/pi/.local/lib/python3.7/site-packages/morphocut/core.py", line 489, in transform_stream + for obj in stream: + File "/home/pi/.local/lib/python3.7/site-packages/morphocut/core.py", line 489, in transform_stream + for obj in stream: + File "/home/pi/.local/lib/python3.7/site-packages/morphocut/core.py", line 489, in transform_stream + for obj in stream: + File "/home/pi/.local/lib/python3.7/site-packages/morphocut/core.py", line 489, in transform_stream + for obj in stream: + File "/home/pi/.local/lib/python3.7/site-packages/morphocut/core.py", line 489, in transform_stream + for obj in stream: + File "/home/pi/.local/lib/python3.7/site-packages/morphocut/stream.py", line 184, in transform_stream + for i, obj in enumerate(stream, start=self.start): + File "/home/pi/.local/lib/python3.7/site-packages/morphocut/core.py", line 489, in transform_stream + for obj in stream: + File "/home/pi/.local/lib/python3.7/site-packages/morphocut/core.py", line 489, in transform_stream + for obj in stream: + File "/home/pi/.local/lib/python3.7/site-packages/morphocut/image.py", line 142, in transform_stream + for obj in stream: + File "/home/pi/.local/lib/python3.7/site-packages/morphocut/core.py", line 489, in transform_stream + for obj in stream: + File "/home/pi/.local/lib/python3.7/site-packages/morphocut/core.py", line 489, in transform_stream + for obj in stream: + File "/home/pi/.local/lib/python3.7/site-packages/morphocut/core.py", line 489, in transform_stream + for obj in stream: + File "/home/pi/.local/lib/python3.7/site-packages/morphocut/core.py", line 489, in transform_stream + for obj in stream: + File "/home/pi/.local/lib/python3.7/site-packages/morphocut/core.py", line 489, in transform_stream + for obj in stream: + File "/home/pi/.local/lib/python3.7/site-packages/morphocut/stream.py", line 68, in transform_stream + for obj in progress: + File "/home/pi/.local/lib/python3.7/site-packages/tqdm/std.py", line 1104, in __iter__ + for obj in iterable: + File "/home/pi/.local/lib/python3.7/site-packages/morphocut/core.py", line 489, in transform_stream + for obj in stream: + File "/home/pi/.local/lib/python3.7/site-packages/morphocut/core.py", line 492, in transform_stream + result = self.transform(*parameters) # pylint: disable=no-member + File "/home/pi/.local/lib/python3.7/site-packages/morphocut/image.py", line 78, in transform + image, in_range=in_range, out_range=self.out_range + File "/home/pi/.local/lib/python3.7/site-packages/skimage/exposure/exposure.py", line 352, in rescale_intensity + image = (image - imin) / float(imax - imin) +MemoryError