add sleep_before, closes #48
This commit is contained in:
Romain Bazile
parent
6a3c3e0355
commit
63102172fc
213
flows/main.json
213
flows/main.json
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@ -734,60 +734,6 @@
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"width": 4,
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"height": 1
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},
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{
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"id": "9698828d.faacb8",
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"type": "ui_spacer",
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"name": "spacer",
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"group": "4322c187.e73e5",
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"order": 6,
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"width": 10,
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"height": 1
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},
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{
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"id": "52335429.3ccffc",
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"type": "ui_spacer",
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"name": "spacer",
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"group": "4322c187.e73e5",
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"order": 9,
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"width": 10,
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"height": 1
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},
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{
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"id": "14361a81.e5f03d",
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"type": "ui_spacer",
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"name": "spacer",
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"group": "b5d61bc7.54fe48",
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"order": 2,
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"width": 6,
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"height": 1
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},
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{
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"id": "d54e2186.0e6d2",
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"type": "ui_spacer",
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"name": "spacer",
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"group": "b5d61bc7.54fe48",
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"order": 3,
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"width": 1,
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"height": 1
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},
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{
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"id": "ff5055f4.d3636",
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"type": "ui_spacer",
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"name": "spacer",
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"group": "b5d61bc7.54fe48",
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"order": 5,
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"width": 1,
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"height": 1
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},
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{
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"id": "67ccad31.7b2c5c",
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"type": "ui_spacer",
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"name": "spacer",
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"group": "b7919ae2.c01788",
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"order": 2,
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"width": 5,
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"height": 1
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},
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{
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"id": "b001a150.faa548",
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"type": "ui_spacer",
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@ -815,6 +761,51 @@
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"width": 10,
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"height": 1
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},
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{
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"id": "de621043.b31528",
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"type": "ui_spacer",
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"name": "spacer",
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"group": "4322c187.e73e5",
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"order": 7,
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"width": 10,
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"height": 1
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},
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{
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"id": "b0a2c4ff.ce75b",
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"type": "ui_spacer",
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"name": "spacer",
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"group": "b5d61bc7.54fe48",
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"order": 2,
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"width": 6,
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"height": 1
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},
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{
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"id": "f1326cca.4ab1f",
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"type": "ui_spacer",
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"name": "spacer",
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"group": "b5d61bc7.54fe48",
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"order": 3,
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"width": 1,
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"height": 1
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},
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{
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"id": "a27ea76d.b9989",
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"type": "ui_spacer",
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"name": "spacer",
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"group": "b5d61bc7.54fe48",
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"order": 5,
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"width": 1,
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"height": 1
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},
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{
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"id": "17a79a42.2912ce",
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"type": "ui_spacer",
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"name": "spacer",
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"group": "b7919ae2.c01788",
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"order": 2,
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"width": 5,
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"height": 1
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},
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{
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"id": "4e78af2d.90be7",
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"type": "ui_ui_control",
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@ -1653,7 +1644,7 @@
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"delay": 300,
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"topic": "acq_id",
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"x": 650,
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"y": 240,
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"y": 280,
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"wires": [
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[
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"fb887036.12429",
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@ -2090,6 +2081,11 @@
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"value": 200,
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"type": "num"
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},
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{
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"label": "300 µm capillary",
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"value": 300,
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"type": "num"
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},
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{
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"label": "400 μm µ-Slide I Luer",
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"value": 400,
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@ -2109,7 +2105,7 @@
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"payload": "",
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"topic": "acq_celltype",
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"x": 630,
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"y": 80,
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"y": 240,
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"wires": [
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[
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"fb887036.12429",
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@ -2170,7 +2166,7 @@
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"type": "function",
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"z": "b771c342.49603",
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"name": "Check form",
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"func": "var sample_project= global.get(\"sample_project\");\nvar sample_ship= global.get(\"sample_ship\");\nvar sample_id= global.get(\"sample_id\");\nvar sample_operator= global.get(\"sample_operator\");\nvar sample_sampling_gear= global.get(\"sample_sampling_gear\");\nvar object_lat= global.get(\"object_lat\");\nvar object_lon= global.get(\"object_lon\");\nvar object_date= global.get(\"object_date\");\nvar object_time= global.get(\"object_time\");\n\nif (sample_project === undefined || sample_project === \"\") {\n msg.topic = \"Missing entry :\"\n msg.payload = \"Sample project\"\n}\n\nelse if (sample_ship === undefined || sample_ship === \"\") {\n msg.topic = \"Missing entry :\"\n msg.payload = \"Sample ship\"\n}\n\nelse if (sample_id === undefined || sample_id === \"\") {\n msg.topic = \"Missing entry :\"\n msg.payload = \"Sample ID\"\n}\n\nelse if (sample_operator === undefined || sample_operator === \"\") {\n msg.topic = \"Missing entry :\"\n msg.payload = \"Sample operator\"\n}\n\nelse if (sample_sampling_gear === undefined || sample_sampling_gear === \"\") {\n msg.topic = \"Missing entry :\"\n msg.payload = \"Sample sampling gear\"\n}\n\nelse if (object_lat === undefined || object_lat === null) {\n msg.topic = \"Missing entry :\"\n msg.payload = \"Latitude of throw\"\n}\n\nelse if (object_lon === undefined || object_lon === null) {\n msg.topic = \"Missing entry :\"\n msg.payload = \"Longitude of throw\"\n}\n\nelse if (object_date === undefined || object_date === \"\") {\n msg.topic = \"Missing entry :\"\n msg.payload = \"Date of throw\"\n}\n\nelse if (object_time === undefined || object_time === \"\") {\n msg.topic = \"Missing entry :\"\n msg.payload = \"Time of throw\"\n}\nelse if (sample_sampling_gear == \"net\"){\n var object_lat_end= global.get(\"object_lat_end\");\n var object_lon_end= global.get(\"object_lon_end\");\n var object_date_end= global.get(\"object_date_end\");\n var object_time_end= global.get(\"object_time_end\");\n\n if (object_lat_end === undefined || object_lat_end === null) {\n msg.topic = \"Missing entry :\"\n msg.payload = \"Latitude of retrieval\"\n }\n \n else if (object_lon_end === undefined || object_lon_end === null) {\n msg.topic = \"Missing entry :\"\n msg.payload = \"Longitude of retrieval\"\n }\n \n else if (object_date_end === undefined || object_date_end === \"\") {\n msg.topic = \"Missing entry :\"\n msg.payload = \"Date of retrieval\"\n }\n \n else if (object_time_end === undefined || object_time_end === \"\") {\n msg.topic = \"Missing entry :\"\n msg.payload = \"Time of retrieval\"\n }\n}\nelse {\n msg.topic = \"Change Tab\"\n msg.payload={\"tab\":\"Optic Configuration\"};\n}\nreturn msg;\n",
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"func": "var sample_project= global.get(\"sample_project\");\nvar sample_ship= global.get(\"sample_ship\");\nvar sample_id= global.get(\"sample_id\");\nvar sample_operator= global.get(\"sample_operator\");\nvar sample_sampling_gear= global.get(\"sample_sampling_gear\");\nvar object_lat= global.get(\"object_lat\");\nvar object_lon= global.get(\"object_lon\");\nvar object_date= global.get(\"object_date\");\nvar object_time= global.get(\"object_time\");\n\nif (sample_project === undefined || sample_project === \"\") {\n msg.topic = \"Missing entry :\"\n msg.payload = \"Sample project\"\n}\n\nelse if (sample_ship === undefined || sample_ship === \"\") {\n msg.topic = \"Missing entry :\"\n msg.payload = \"Sample ship\"\n}\n\nelse if (sample_id === undefined || sample_id === \"\") {\n msg.topic = \"Missing entry :\"\n msg.payload = \"Sample ID\"\n}\n\nelse if (sample_operator === undefined || sample_operator === \"\") {\n msg.topic = \"Missing entry :\"\n msg.payload = \"Sample operator\"\n}\n\nelse if (sample_sampling_gear === undefined || sample_sampling_gear === \"\") {\n msg.topic = \"Missing entry :\"\n msg.payload = \"Sample sampling gear\"\n}\n\nelse if (object_lat === undefined || object_lat === null) {\n msg.topic = \"Missing entry :\"\n msg.payload = \"Latitude of throw\"\n}\n\nelse if (object_lon === undefined || object_lon === null) {\n msg.topic = \"Missing entry :\"\n msg.payload = \"Longitude of throw\"\n}\n\nelse if (object_date === undefined || object_date === \"\") {\n msg.topic = \"Missing entry :\"\n msg.payload = \"Date of throw\"\n}\n\nelse if (object_time === undefined || object_time === \"\") {\n msg.topic = \"Missing entry :\"\n msg.payload = \"Time of throw\"\n}\nelse if (sample_sampling_gear == \"net\"){\n var object_lat_end= global.get(\"object_lat_end\");\n var object_lon_end= global.get(\"object_lon_end\");\n var object_date_end= global.get(\"object_date_end\");\n var object_time_end= global.get(\"object_time_end\");\n\n if (object_lat_end === undefined || object_lat_end === null) {\n msg.topic = \"Missing entry :\"\n msg.payload = \"Latitude of retrieval\"\n }\n \n else if (object_lon_end === undefined || object_lon_end === null) {\n msg.topic = \"Missing entry :\"\n msg.payload = \"Longitude of retrieval\"\n }\n \n else if (object_date_end === undefined || object_date_end === \"\") {\n msg.topic = \"Missing entry :\"\n msg.payload = \"Date of retrieval\"\n }\n \n else if (object_time_end === undefined || object_time_end === \"\") {\n msg.topic = \"Missing entry :\"\n msg.payload = \"Time of retrieval\"\n }\n else {\n msg.topic = \"Change Tab\"\n msg.payload={\"tab\":\"Optic Configuration\"};\n }\n}\nelse {\n msg.topic = \"Change Tab\"\n msg.payload={\"tab\":\"Optic Configuration\"};\n}\nreturn msg;\n",
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"outputs": 1,
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"noerr": 0,
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"initialize": "",
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@ -2927,35 +2923,17 @@
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"order": 6,
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"width": 0,
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"height": 0,
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"format": "<div >\n <strong>Sample Project:</strong> <span id=\"max_size\" ng-bind-html=\"msg.payload.sample_project\"></span><br>\n <strong>Sample Ship:</strong> <span id=\"max_size\" ng-bind-html=\"msg.payload.sample_ship\"></span><br>\n <strong>sample operator:</strong> <span id=\"max_size\" ng-bind-html=\"msg.payload.sample_operator\"></span><br>\n <strong>sample id:</strong> <span id=\"max_size\" ng-bind-html=\"msg.payload.sample_id\"></span><br>\n <strong>sample sampling_gear:</strong> <span id=\"max_size\" ng-bind-html=\"msg.payload.sample_sampling_gear\"></span><br>\n\n <strong>acq id:</strong> <span id=\"max_size\" ng-bind-html=\"msg.payload.acq_id\"></span><br>\n <strong>acq instrument:</strong> <span id=\"max_size\" ng-bind-html=\"msg.payload.acq_instrument\"></span><br>\n <strong>acq instrument_id:</strong> <span id=\"max_size\" ng-bind-html=\"msg.payload.acq_instrument_id\"></span><br>\n <strong>acq camera:</strong> <span id=\"max_size\" ng-bind-html=\"msg.payload.acq_camera\"></span><br>\n <strong>acq celltype:</strong> <span id=\"max_size\" ng-bind-html=\"msg.payload.acq_celltype\"></span><br>\n <strong>acq minimum_mesh:</strong> <span id=\"max_size\" ng-bind-html=\"msg.payload.acq_minimum_mesh\"></span><br>\n <strong>acq maximum_mesh:</strong> <span id=\"max_size\" ng-bind-html=\"msg.payload.acq_maximum_mesh\"></span><br>\n <strong>acq min_esd:</strong> <span id=\"max_size\" ng-bind-html=\"msg.payload.acq_min_esd\"></span><br>\n <strong>acq max_esd:</strong> <span id=\"max_size\" ng-bind-html=\"msg.payload.acq_max_esd\"></span><br>\n <strong>acq volume:</strong> <span id=\"max_size\" ng-bind-html=\"msg.payload.acq_volume\"></span><br>\n <strong>acq magnification:</strong> <span id=\"max_size\" ng-bind-html=\"msg.payload.acq_magnification\"></span><br>\n <strong>acq fnumber_objective:</strong> <span id=\"max_size\" ng-bind-html=\"msg.payload.acq_fnumber_objective\"></span><br>\n <strong>acq software:</strong> <span id=\"max_size\" ng-bind-html=\"msg.payload.acq_software\"></span><br>\n <strong>acq flowrate:</strong> <span id=\"max_size\" ng-bind-html=\"msg.payload.sug_flowrate\"></span><br>\n\n <strong>object lat:</strong> <span id=\"max_size\" ng-bind-html=\"msg.payload.object_lat\"></span><br>\n <strong>object lon:</strong> <span id=\"max_size\" ng-bind-html=\"msg.payload.object_lon\"></span><br>\n <strong>object lat end:</strong> <span id=\"max_size\" ng-bind-html=\"msg.payload.object_lat_end\"></span><br>\n <strong>object lon end:</strong> <span id=\"max_size\" ng-bind-html=\"msg.payload.object_lon_end\"></span><br>\n <strong>object date:</strong> <span id=\"max_size\" ng-bind-html=\"msg.payload.object_date\"></span><br>\n <strong>object time:</strong> <span id=\"max_size\" ng-bind-html=\"msg.payload.object_time\"></span><br>\n <strong>object date end:</strong> <span id=\"max_size\" ng-bind-html=\"msg.payload.object_date_end\"></span><br>\n <strong>object time end:</strong> <span id=\"max_size\" ng-bind-html=\"msg.payload.object_time_end\"></span><br>\n <strong>object depth min:</strong> <span id=\"max_size\" ng-bind-html=\"msg.payload.object_depth_min\"></span><br>\n <strong>object depth max:</strong> <span id=\"max_size\" ng-bind-html=\"msg.payload.object_depth_max\"></span><br>\n\n <strong>process pixel:</strong> <span id=\"max_size\" ng-bind-html=\"msg.payload.process_pixel\"></span><br>\n <strong>process id:</strong> <span id=\"max_size\" ng-bind-html=\"msg.payload.process_id\"></span>\n</div>\n",
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"format": "<div >\n <strong>Sample Project:</strong> <span id=\"max_size\" ng-bind-html=\"msg.payload.config.sample_project\"></span><br>\n <strong>Sample Ship:</strong> <span id=\"max_size\" ng-bind-html=\"msg.payload.config.sample_ship\"></span><br>\n <strong>sample operator:</strong> <span id=\"max_size\" ng-bind-html=\"msg.payload.config.sample_operator\"></span><br>\n <strong>sample id:</strong> <span id=\"max_size\" ng-bind-html=\"msg.payload.config.sample_id\"></span><br>\n <strong>sample sampling_gear:</strong> <span id=\"max_size\" ng-bind-html=\"msg.payload.config.sample_sampling_gear\"></span><br>\n\n <strong>acq id:</strong> <span id=\"max_size\" ng-bind-html=\"msg.payload.config.acq_id\"></span><br>\n <strong>acq instrument:</strong> <span id=\"max_size\" ng-bind-html=\"msg.payload.config.acq_instrument\"></span><br>\n <strong>acq instrument_id:</strong> <span id=\"max_size\" ng-bind-html=\"msg.payload.config.acq_instrument_id\"></span><br>\n <strong>acq camera:</strong> <span id=\"max_size\" ng-bind-html=\"msg.payload.config.acq_camera\"></span><br>\n <strong>acq celltype:</strong> <span id=\"max_size\" ng-bind-html=\"msg.payload.config.acq_celltype\"></span><br>\n <strong>acq minimum_mesh:</strong> <span id=\"max_size\" ng-bind-html=\"msg.payload.config.acq_minimum_mesh\"></span><br>\n <strong>acq maximum_mesh:</strong> <span id=\"max_size\" ng-bind-html=\"msg.payload.config.acq_maximum_mesh\"></span><br>\n <strong>acq min_esd:</strong> <span id=\"max_size\" ng-bind-html=\"msg.payload.config.acq_min_esd\"></span><br>\n <strong>acq max_esd:</strong> <span id=\"max_size\" ng-bind-html=\"msg.payload.config.acq_max_esd\"></span><br>\n <strong>acq volume:</strong> <span id=\"max_size\" ng-bind-html=\"msg.payload.config.acq_volume\"></span><br>\n <strong>acq magnification:</strong> <span id=\"max_size\" ng-bind-html=\"msg.payload.config.acq_magnification\"></span><br>\n <strong>acq fnumber_objective:</strong> <span id=\"max_size\" ng-bind-html=\"msg.payload.config.acq_fnumber_objective\"></span><br>\n <strong>acq software:</strong> <span id=\"max_size\" ng-bind-html=\"msg.payload.config.acq_software\"></span><br>\n <strong>acq flowrate:</strong> <span id=\"max_size\" ng-bind-html=\"msg.payload.config.sug_flowrate\"></span><br>\n\n <strong>object lat:</strong> <span id=\"max_size\" ng-bind-html=\"msg.payload.config.object_lat\"></span><br>\n <strong>object lon:</strong> <span id=\"max_size\" ng-bind-html=\"msg.payload.config.object_lon\"></span><br>\n <strong>object lat end:</strong> <span id=\"max_size\" ng-bind-html=\"msg.payload.config.object_lat_end\"></span><br>\n <strong>object lon end:</strong> <span id=\"max_size\" ng-bind-html=\"msg.payload.config.object_lon_end\"></span><br>\n <strong>object date:</strong> <span id=\"max_size\" ng-bind-html=\"msg.payload.config.object_date\"></span><br>\n <strong>object time:</strong> <span id=\"max_size\" ng-bind-html=\"msg.payload.config.object_time\"></span><br>\n <strong>object date end:</strong> <span id=\"max_size\" ng-bind-html=\"msg.payload.config.object_date_end\"></span><br>\n <strong>object time end:</strong> <span id=\"max_size\" ng-bind-html=\"msg.payload.config.object_time_end\"></span><br>\n <strong>object depth min:</strong> <span id=\"max_size\" ng-bind-html=\"msg.payload.config.object_depth_min\"></span><br>\n <strong>object depth max:</strong> <span id=\"max_size\" ng-bind-html=\"msg.payload.config.object_depth_max\"></span><br>\n\n <strong>process pixel:</strong> <span id=\"max_size\" ng-bind-html=\"msg.payload.config.process_pixel\"></span><br>\n <strong>process id:</strong> <span id=\"max_size\" ng-bind-html=\"msg.payload.config.process_id\"></span>\n</div>\n",
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"storeOutMessages": true,
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"fwdInMessages": true,
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"resendOnRefresh": false,
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"templateScope": "local",
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"x": 950,
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"x": 1250,
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"y": 500,
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"wires": [
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[]
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]
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},
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{
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"id": "e2919164.70927",
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"type": "function",
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"z": "baa1e3d9.cb29d",
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"name": "get global",
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"func": "msg.payload = {\n \"sample_project\":global.get(\"sample_project\"),\n \"sample_ship\":global.get(\"sample_ship\"),\n \"sample_operator\":global.get(\"sample_operator\"),\n \"sample_id\":global.get(\"sample_id\"),\n \"sample_sampling_gear\":global.get(\"sample_sampling_gear\"),\n \n \"acq_id\":global.get(\"acq_id\"),\n \"acq_instrument\":global.get(\"acq_instrument\"),\n \"acq_instrument_id\":global.get(\"acq_instrument_id\"),\n \"acq_camera\":global.get(\"acq_camera\"),\n \"acq_celltype\":global.get(\"acq_celltype\"),\n \"acq_minimum_mesh\":global.get(\"acq_minimum_mesh\"),\n \"acq_maximum_mesh\":global.get(\"acq_maximum_mesh\"),\n \"acq_min_esd\":global.get(\"acq_min_esd\"),\n \"acq_max_esd\":global.get(\"acq_max_esd\"),\n \"acq_volume\":global.get(\"acq_volume\"),\n \"acq_magnification\":global.get(\"acq_magnification\"),\n \"acq_fnumber_objective\":global.get(\"acq_fnumber_objective\"),\n \"acq_software\":global.get(\"acq_software\"),\n \"acq_flowrate\":global.get(\"sug_flowrate\"),\n \n \"object_lat\":global.get(\"object_lat\"),\n \"object_lon\":global.get(\"object_lon\"),\n \"object_lat_end\":global.get(\"object_lat_end\"),\n \"object_lon_end\":global.get(\"object_lon_end\"),\n \"object_date\":global.get(\"object_date\"),\n \"object_time\":global.get(\"object_time\"),\n \"object_date_end\":global.get(\"object_date_end\"),\n \"object_time_end\":global.get(\"object_time_end\"),\n \"object_depth_min\":global.get(\"object_depth_min\"),\n \"object_depth_max\":global.get(\"object_depth_max\"),\n \n \"process_pixel\":global.get(\"process_pixel\"),\n \"process_id\":global.get(\"process_id\")\n \n}\n\nreturn msg;",
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"outputs": 1,
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"noerr": 0,
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"initialize": "",
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"finalize": "",
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"x": 780,
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"y": 500,
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"wires": [
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[
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"29be525e.0c87fe"
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]
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]
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},
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{
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"id": "cbb8afed.0a026",
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"type": "rpi-gpio out",
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@ -3948,7 +3926,7 @@
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"type": "function",
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"z": "baa1e3d9.cb29d",
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"name": "Image control",
|
||||
"func": "state = global.get(\"state\");\nglobal.set('img_counter',0);\nglobal.set('obj_counter',0);\nif (state === null){state=\"free\"}\n\nvar nb_frame= global.get(\"nb_frame\");\nvar acq_celltype= global.get(\"acq_celltype\");\nvar acq_minimum_mesh= global.get(\"acq_minimum_mesh\");\nvar acq_maximum_mesh= global.get(\"acq_maximum_mesh\");\nvar acq_id= global.get(\"acq_id\");\nvar pump_direction= global.get(\"pump_direction\");\nvar imaging_pump_volume= global.get(\"imaging_pump_volume\");\n\nif (acq_celltype === undefined || acq_celltype === \"\") {\n msg.topic = \"Missing entry :\"\n msg.payload = \"Type of the flowcell\"\n}else if (acq_minimum_mesh === undefined || acq_minimum_mesh === \"\") {\n msg.topic = \"Missing entry :\"\n msg.payload = \"Lower fraction size\"\n}else if (acq_maximum_mesh === undefined || acq_maximum_mesh === \"\") {\n msg.topic = \"Missing entry :\"\n msg.payload = \"Upper fraction size\"\n}else if (imaging_pump_volume === undefined || imaging_pump_volume === \"\" || imaging_pump_volume === null) {\n msg.topic = \"Missing entry :\"\n msg.payload = \"Volume inbetween images\"\n}else if (acq_id === undefined || acq_id === \"\") {\n msg.topic = \"Missing entry :\"\n msg.payload = \"Acquisition ID\"\n}else if (nb_frame === undefined || nb_frame === \"\" || nb_frame === null) {\n msg.topic = \"Missing entry :\";\n msg.payload = \"Number of image to save\";\n \n}else if (pump_direction === undefined || pump_direction === \"\" || pump_direction === null) {\n msg.topic = \"Missing entry :\";\n msg.payload = \"Pump direction\";\n \n}else {\n msg.payload={\"action\":\"image\", \n \"sleep\":1,\n \"pump_direction\": pump_direction,\n \"volume\":imaging_pump_volume,\n \"nb_frame\":nb_frame,\n }\n}\n\nreturn msg;",
|
||||
"func": "state = global.get(\"state\");\nglobal.set('img_counter', 0);\nglobal.set('obj_counter', 0);\nif (state === null) {\n state = \"free\"\n}\n\nvar nb_frame = global.get(\"nb_frame\");\nvar acq_celltype = global.get(\"acq_celltype\");\nvar acq_minimum_mesh = global.get(\"acq_minimum_mesh\");\nvar acq_maximum_mesh = global.get(\"acq_maximum_mesh\");\nvar acq_id = global.get(\"acq_id\");\nvar pump_direction = global.get(\"pump_direction\");\nvar imaging_pump_volume = global.get(\"imaging_pump_volume\");\nvar sleep_before = global.get(\"sleep_before\");\n\nif (acq_celltype === undefined || acq_celltype === \"\") {\n msg.topic = \"Missing entry :\"\n msg.payload = \"Type of the flowcell\"\n} else if (acq_minimum_mesh === undefined || acq_minimum_mesh === \"\") {\n msg.topic = \"Missing entry :\"\n msg.payload = \"Lower fraction size\"\n} else if (acq_maximum_mesh === undefined || acq_maximum_mesh === \"\") {\n msg.topic = \"Missing entry :\"\n msg.payload = \"Upper fraction size\"\n} else if (imaging_pump_volume === undefined || imaging_pump_volume === \"\" || imaging_pump_volume === null) {\n msg.topic = \"Missing entry :\"\n msg.payload = \"Volume inbetween images\"\n} else if (acq_id === undefined || acq_id === \"\") {\n msg.topic = \"Missing entry :\"\n msg.payload = \"Acquisition ID\"\n} else if (nb_frame === undefined || nb_frame === \"\" || nb_frame === null) {\n msg.topic = \"Missing entry :\";\n msg.payload = \"Number of image to save\";\n} else if (pump_direction === undefined || pump_direction === \"\" || pump_direction === null) {\n msg.topic = \"Missing entry :\";\n msg.payload = \"Pump direction\";\n} else if (sleep_before === undefined || sleep_before === \"\" || pump_direction === null) {\n msg.topic = \"Missing entry :\";\n msg.payload = \"Delay before image\";\n} else {\n msg.payload = {\n \"action\": \"image\",\n \"sleep\": sleep_before,\n \"pump_direction\": pump_direction,\n \"volume\": imaging_pump_volume,\n \"nb_frame\": nb_frame,\n }\n}\n\nreturn msg;",
|
||||
"outputs": 1,
|
||||
"noerr": 0,
|
||||
"initialize": "",
|
||||
|
|
@ -4076,7 +4054,7 @@
|
|||
"label": "Pump direction",
|
||||
"tooltip": "BACKWARD / FORWARD",
|
||||
"group": "4322c187.e73e5",
|
||||
"order": 7,
|
||||
"order": 8,
|
||||
"width": 5,
|
||||
"height": 1,
|
||||
"passthru": true,
|
||||
|
|
@ -4113,7 +4091,8 @@
|
|||
"y": 540,
|
||||
"wires": [
|
||||
[
|
||||
"c3e50240.82aa58"
|
||||
"c3e50240.82aa58",
|
||||
"29be525e.0c87fe"
|
||||
]
|
||||
]
|
||||
},
|
||||
|
|
@ -4146,7 +4125,7 @@
|
|||
"z": "baa1e3d9.cb29d",
|
||||
"name": "",
|
||||
"group": "4322c187.e73e5",
|
||||
"order": 8,
|
||||
"order": 9,
|
||||
"width": 5,
|
||||
"height": 1,
|
||||
"passthru": false,
|
||||
|
|
@ -4163,7 +4142,6 @@
|
|||
"wires": [
|
||||
[
|
||||
"52ea7d01.711034",
|
||||
"e2919164.70927",
|
||||
"a4abb1ae.2ae418"
|
||||
]
|
||||
]
|
||||
|
|
@ -4681,7 +4659,7 @@
|
|||
"z": "baa1e3d9.cb29d",
|
||||
"name": "",
|
||||
"x": 90,
|
||||
"y": 160,
|
||||
"y": 200,
|
||||
"wires": [
|
||||
[
|
||||
"f3658d30.b8448",
|
||||
|
|
@ -4702,8 +4680,8 @@
|
|||
"noerr": 0,
|
||||
"initialize": "",
|
||||
"finalize": "",
|
||||
"x": 310,
|
||||
"y": 240,
|
||||
"x": 300,
|
||||
"y": 280,
|
||||
"wires": [
|
||||
[
|
||||
"6b34c456.83178c"
|
||||
|
|
@ -4719,7 +4697,7 @@
|
|||
"outputs": 1,
|
||||
"noerr": 0,
|
||||
"x": 320,
|
||||
"y": 80,
|
||||
"y": 240,
|
||||
"wires": [
|
||||
[
|
||||
"cc0ca68b.4263a8"
|
||||
|
|
@ -4936,7 +4914,7 @@
|
|||
"payload": "10",
|
||||
"payloadType": "num",
|
||||
"x": 310,
|
||||
"y": 280,
|
||||
"y": 320,
|
||||
"wires": [
|
||||
[
|
||||
"51b4d0df.d70a88"
|
||||
|
|
@ -5070,8 +5048,8 @@
|
|||
"z": "baa1e3d9.cb29d",
|
||||
"name": "",
|
||||
"env": [],
|
||||
"x": 770,
|
||||
"y": 460,
|
||||
"x": 930,
|
||||
"y": 500,
|
||||
"wires": [
|
||||
[]
|
||||
]
|
||||
|
|
@ -5092,7 +5070,7 @@
|
|||
"delay": 300,
|
||||
"topic": "nb_frame",
|
||||
"x": 640,
|
||||
"y": 280,
|
||||
"y": 320,
|
||||
"wires": [
|
||||
[
|
||||
"fb887036.12429",
|
||||
|
|
@ -6023,7 +6001,7 @@
|
|||
"type": "ui_text",
|
||||
"z": "baa1e3d9.cb29d",
|
||||
"group": "4322c187.e73e5",
|
||||
"order": 5,
|
||||
"order": 6,
|
||||
"width": 5,
|
||||
"height": 1,
|
||||
"name": "Pump volume",
|
||||
|
|
@ -6039,7 +6017,7 @@
|
|||
"type": "function",
|
||||
"z": "baa1e3d9.cb29d",
|
||||
"name": "pump volume calc",
|
||||
"func": "var acq_volume = global.get(\"acq_volume\");\nvar nb_frame = global.get(\"nb_frame\");\n\nvar pump_volume = Math.max((Number(acq_volume) / Number(nb_frame)), 0.01).toFixed(4)\n\nglobal.set(\"imaging_pump_volume\", pump_volume)\n\nmsg.payload = pump_volume + \" mL per frame\"\nreturn msg;",
|
||||
"func": "var acq_volume = global.get(\"acq_volume\");\nvar nb_frame = global.get(\"nb_frame\");\n\nvar pump_volume = Math.max((Number(acq_volume) / Number(nb_frame)), 0.01).toFixed(3)\n\nglobal.set(\"imaging_pump_volume\", pump_volume)\n\nmsg.payload = pump_volume + \" mL/frame\"\nreturn msg;",
|
||||
"outputs": 1,
|
||||
"noerr": 0,
|
||||
"initialize": "",
|
||||
|
|
@ -6740,5 +6718,56 @@
|
|||
"wires": [
|
||||
[]
|
||||
]
|
||||
},
|
||||
{
|
||||
"id": "a8bf2334.279c",
|
||||
"type": "inject",
|
||||
"z": "baa1e3d9.cb29d",
|
||||
"name": "Default: 0.5",
|
||||
"props": [
|
||||
{
|
||||
"p": "payload"
|
||||
}
|
||||
],
|
||||
"repeat": "",
|
||||
"crontab": "",
|
||||
"once": true,
|
||||
"onceDelay": 0.1,
|
||||
"topic": "",
|
||||
"payload": "0.5",
|
||||
"payloadType": "num",
|
||||
"x": 310,
|
||||
"y": 80,
|
||||
"wires": [
|
||||
[
|
||||
"49ea1123.ee1768"
|
||||
]
|
||||
]
|
||||
},
|
||||
{
|
||||
"id": "49ea1123.ee1768",
|
||||
"type": "ui_numeric",
|
||||
"z": "baa1e3d9.cb29d",
|
||||
"name": "sleep_before",
|
||||
"label": "Delay to stabilize image (s)",
|
||||
"tooltip": "Happens before every capture",
|
||||
"group": "4322c187.e73e5",
|
||||
"order": 5,
|
||||
"width": 5,
|
||||
"height": 2,
|
||||
"wrap": false,
|
||||
"passthru": true,
|
||||
"topic": "sleep_before",
|
||||
"format": "{{value}}",
|
||||
"min": "0.1",
|
||||
"max": "5",
|
||||
"step": "0.1",
|
||||
"x": 630,
|
||||
"y": 80,
|
||||
"wires": [
|
||||
[
|
||||
"fb887036.12429"
|
||||
]
|
||||
]
|
||||
}
|
||||
]
|
||||
|
|
@ -595,9 +595,6 @@ class ImagerProcess(multiprocessing.Process):
|
|||
f"The integrity file already exists in this export path {self.__export_path}"
|
||||
)
|
||||
|
||||
# Sleep a duration before to start acquisition
|
||||
time.sleep(self.__sleep_before)
|
||||
|
||||
# Set the LEDs as Blue
|
||||
planktoscope.light.setRGB(0, 0, 255)
|
||||
|
||||
|
|
@ -624,6 +621,9 @@ class ImagerProcess(multiprocessing.Process):
|
|||
f"Capturing image {self.__img_done + 1}/{self.__img_goal} to {filename_path}"
|
||||
)
|
||||
|
||||
# Sleep a duration before to start acquisition
|
||||
time.sleep(self.__sleep_before)
|
||||
|
||||
# Capture an image with the proper filename
|
||||
try:
|
||||
self.__camera.capture(filename_path)
|
||||
|
|
|
|||
Loading…
Reference in a new issue