diff --git a/scripts/planktoscope/display.py b/scripts/planktoscope/display.py index fbd9097..e2c833b 100644 --- a/scripts/planktoscope/display.py +++ b/scripts/planktoscope/display.py @@ -31,6 +31,7 @@ class Display(object): logger.success("planktoscope.display is ready!") except Exception as e: logger.error("Could not detect the display") + logger.error(f"Exception was {e}") self.display_available = False def display_machine_name(self): diff --git a/scripts/planktoscope/imager/raspimjpeg.py b/scripts/planktoscope/imager/raspimjpeg.py index 42da349..5acbf4f 100644 --- a/scripts/planktoscope/imager/raspimjpeg.py +++ b/scripts/planktoscope/imager/raspimjpeg.py @@ -181,7 +181,7 @@ class raspimjpeg(object): return status except FileNotFoundError as e: logger.error( - f"The status file was not found, make sure the filesystem has not been corrupted" + "The status file was not found, make sure the filesystem has not been corrupted" ) return "" @@ -489,7 +489,7 @@ class raspimjpeg(object): """ logger.debug(f"Capturing an image to {path}") if path == "": - self.__send_command(f"im") + self.__send_command("im") else: self.__send_command(f"im {path}") time.sleep(0.1) @@ -500,7 +500,7 @@ class raspimjpeg(object): def stop(self): """Halt and release the camera.""" logger.debug("Releasing the camera now") - self.__send_command(f"ru 0") + self.__send_command("ru 0") def close(self): """Kill the process.""" diff --git a/scripts/planktoscope/imager/state_machine.py b/scripts/planktoscope/imager/state_machine.py index cc41d42..569168d 100644 --- a/scripts/planktoscope/imager/state_machine.py +++ b/scripts/planktoscope/imager/state_machine.py @@ -22,7 +22,7 @@ class ImagerState(object): allowed = [] def switch(self, state): - """ Switch to new state """ + """Switch to new state""" if state.name in self.allowed: logger.info(f"Current:{self} => switched to new state {state.name}") self.__class__ = state @@ -39,33 +39,33 @@ class Stop(ImagerState): class Imaging(ImagerState): - """ State of getting ready to start """ + """State of getting ready to start""" name = "imaging" allowed = ["waiting", "stop"] class Waiting(ImagerState): - """ State of waiting for the pump to finish """ + """State of waiting for the pump to finish""" name = "waiting" allowed = ["stop", "capture"] class Capture(ImagerState): - """ State of capturing image """ + """State of capturing image""" name = "capture" allowed = ["stop", "waiting"] class Imager(object): - """ A class representing the imager """ + """A class representing the imager""" def __init__(self): # State of the imager - default is stop. self.state = Stop() def change(self, state): - """ Change state """ + """Change state""" self.state.switch(state) diff --git a/scripts/planktoscope/imager/streamer.py b/scripts/planktoscope/imager/streamer.py index 06185e3..01f1cea 100644 --- a/scripts/planktoscope/imager/streamer.py +++ b/scripts/planktoscope/imager/streamer.py @@ -35,7 +35,7 @@ class StreamingHandler(http.server.BaseHTTPRequestHandler): with open("/dev/shm/mjpeg/cam.jpg", "rb") as jpeg: # nosec frame = jpeg.read() except FileNotFoundError as e: - logger.error(f"Camera has not been started yet") + logger.error("Camera has not been started yet") time.sleep(5) except Exception as e: logger.exception(f"An exception occured {e}") diff --git a/scripts/planktoscope/integrity.py b/scripts/planktoscope/integrity.py index 8a83a85..c2200af 100644 --- a/scripts/planktoscope/integrity.py +++ b/scripts/planktoscope/integrity.py @@ -202,4 +202,4 @@ if __name__ == "__main__": exit(error) print("All the files are valid") - exit(0) \ No newline at end of file + exit(0) diff --git a/scripts/planktoscope/mqtt.py b/scripts/planktoscope/mqtt.py index 07b6645..1632fbc 100644 --- a/scripts/planktoscope/mqtt.py +++ b/scripts/planktoscope/mqtt.py @@ -117,20 +117,20 @@ class MQTT_Client: # When connected, run subscribe() self.client.subscribe(self.topic) - @logger.catch # Run this function in order to subscribe to all the topics begining by actuator + @logger.catch def on_subscribe(self, client, obj, mid, granted_qos): # Print when subscribed # TODO Fix bug when this is called outside of this init function (for example when the imager subscribe to status/pump) logger.success( - f"{self.name} subscribed to {self.topic}! - mid:{str(mid)} qos:{str(granted_qos)}" + f"{self.name} subscribed to {self.topic}! - mid:{mid} qos:{granted_qos}" ) # Run this command when Node-RED is sending a message on the subscribed topic @logger.catch def on_message(self, client, userdata, msg): # Print the topic and the message - logger.info(f"{self.name}: {msg.topic} {str(msg.qos)} {str(msg.payload)}") + logger.info(f"{self.name}: {msg.topic} {msg.qos} {msg.payload}") # Parse the topic to find the command. ex : actuator/pump -> pump # This only removes the top-level topic! self.command = msg.topic.split("/", 1)[1] @@ -157,7 +157,7 @@ class MQTT_Client: return self.__new_message def read_message(self): - logger.debug(f"clearing the __new_message flag") + logger.debug("clearing the __new_message flag") self.__new_message = False @logger.catch @@ -170,4 +170,4 @@ class MQTT_Client: # This is called if this script is launched directly if __name__ == "__main__": # TODO This should be a test suite for this library - pass \ No newline at end of file + pass diff --git a/scripts/planktoscope/segmenter/operations.py b/scripts/planktoscope/segmenter/operations.py index a4343b4..f9c09f9 100644 --- a/scripts/planktoscope/segmenter/operations.py +++ b/scripts/planktoscope/segmenter/operations.py @@ -36,7 +36,7 @@ def adaptative_threshold(img): # logger.debug(resource.getrusage(resource.RUSAGE_SELF).ru_maxrss) # logger.debug(time.monotonic() - start) # logger.success(f"Threshold used was {ret}") - logger.success(f"Adaptative threshold is done") + logger.success("Adaptative threshold is done") return mask @@ -62,7 +62,7 @@ def simple_threshold(img): # logger.debug(resource.getrusage(resource.RUSAGE_SELF).ru_maxrss) # logger.debug(time.monotonic() - start) logger.info(f"Threshold value used was {ret}") - logger.success(f"Simple threshold is done") + logger.success("Simple threshold is done") return mask diff --git a/scripts/planktoscope/uuidName.py b/scripts/planktoscope/uuidName.py index 119df70..5f38eb4 100644 --- a/scripts/planktoscope/uuidName.py +++ b/scripts/planktoscope/uuidName.py @@ -35,11 +35,10 @@ def uuidMachineName(machine="", type=1): """ if type == 4: id = str(uuid.uuid4()) + elif machine == "": + id = str(uuid.uuid1()) else: - if machine == "": - id = str(uuid.uuid1()) - else: - id = str(uuid.uuid1(node=int(str(machine)[-12:], 16))) + id = str(uuid.uuid1(node=int(str(machine)[-12:], 16))) name = "" x = id.rsplit("-", 1) machine = x[1] @@ -84,13 +83,13 @@ def uuidMachine(machine="", type=1): str: universally unique id """ if type == 4: - id = str(uuid.uuid4()) + return str(uuid.uuid4()) else: - if machine == "": - id = str(uuid.uuid1()) - else: - id = str(uuid.uuid1(node=int(str(machine)[-12:], 16))) - return id + return ( + str(uuid.uuid1()) + if machine == "" + else str(uuid.uuid1(node=int(str(machine)[-12:], 16))) + ) def uuidName(): @@ -151,12 +150,12 @@ def getSerial(): Returns: str: serial number or MAC address """ - if os.path.exists("/sys/firmware/devicetree/base/serial-number"): - with open("/sys/firmware/devicetree/base/serial-number", "r") as serial_file: - return serial_file.readline().strip("\x00") - else: + if not os.path.exists("/sys/firmware/devicetree/base/serial-number"): return str(uuid.getnode()) + with open("/sys/firmware/devicetree/base/serial-number", "r") as serial_file: + return serial_file.readline().strip("\x00") + if __name__ == "__main__": print("Type 4:")