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-# PlanktonScope
+==========================
+PlanktonScope Installation
+==========================
-Please find the documentation here :
-https://planktonscope.readthedocs.io/en/latest/index.html
+*************************************
+Install Raspbian on your Raspberry Pi
+*************************************
+
+Download the image
+==================
+
+Download the .zip file of Raspbian Buster with desktop from the Raspberry Pi website Downloads page.
+
+Writing an image to the SD card
+
+Download the latest version of balenaEtcher and install it.
+
+Connect an SD card reader with the micro SD card inside.
+
+Open balenaEtcher and select from your hard drive the Raspberry Pi .zip file you wish to write to the SD card.
+
+Select the SD card you wish to write your image to.
+
+Review your selections and click 'Flash!' to begin writing data to the SD card.
+
+Prepare your Raspberry Pi
+-------------------------
+`Getting Started with your Raspberry Pi `_
+
+Plug the SD Card in your Raspberry Pi
+
+Connect your Pi to a screen, mouse, keyboard and power
+
+Finish the setup
+
+Make sure you have access to internet and update/upgrade your fresh raspbian
+
+Update your Pi first
+::
+ sudo apt-get update -y
+ sudo apt-get upgrade -y
+
+Reboot your Pi safely
+::
+ sudo reboot now
+
+***************************
+Raspberry Pi configurations
+***************************
+
+Enable Camera/SSH/I2C in raspi-config
+
+Open up the configuration page and select Interfacing Options by typing this command:
+::
+ sudo raspi-config
+
+Select **Serial**
+
+Select **NO**
+
+Keep the **Serial Port Hardware enabled**
+
+Reboot your Pi safely
+::
+ sudo reboot now
+
+
+**************************************************
+Install the needed libraries for the PlanktonScope
+**************************************************
+
+Install CircuitPython
+=====================
+`Installing CircuitPython on Raspberry Pi `_
+
+Run the following command to install adafruit_blinka
+::
+ pip3 install adafruit-blinka
+ sudo pip3 install adafruit-circuitpython-motorkit
+
+Install RPi Cam Web Interface
+=============================
+
+`RPi Cam Web Interface `_
+
+Clone the code from github and enable and run the install script with the following commands
+::
+ git clone https://github.com/silvanmelchior/RPi_Cam_Web_Interface.git
+ cd RPi_Cam_Web_Interface
+ ./install.sh
+
+Press Enter to allow default setting of the installation
+Press Enter to start RPi Cam Web Interface now
+Found what is the IP of your Raspberry Pi
+::
+ sudo ip addr show | grep 'inet 1'
+
+Reach the url on a local browser : http://127.0.0.1/html/
+
+Install Ultimate GPS HAT
+========================
+`Installing Adafruit GPS HAT `_
+
+`Use Python Thread with GPS HAT `_
+
+::
+ sudo apt-get install python gpsd gpsd-clients
+
+Install RGB Cooling HAT
+=======================
+`Installing RGB Cooling HAT `_
+Type these command to install:
+::
+ git clone https://github.com/WiringPi/WiringPi.git
+ cd WiringPi
+ sudo ./build
+ sudo apt-get install gcc
+
+Install Node-RED
+==================
+`Installing Node-RED on Raspberry Pi `_
+
+Prerequisites
+-------------
+Ensure npm is able to build any binary modules it needs to install.
+::
+ sudo apt-get install build-essential
+
+Download and installation
+-------------------------
+To install Node.js, npm and Node-RED onto a Raspberry Pi, run the following command will that download and install them:
+::
+ bash <(curl -sL https://raw.githubusercontent.com/node-red/linux-installers/master/deb/update-nodejs-and-nodered)
+
+Due to the limited memory of the Raspberry Pi, you will need to start Node-RED with an additional argument to tell the underlying Node.js process to free up unused memory sooner than it would otherwise.
+::
+ node-red-pi --max-old-space-size=256
+
+Autostart on boot
+-----------------
+Run Node-RED when the Pi is turned on, or re-booted, enable the service to autostart by running the command:
+::
+ sudo systemctl enable nodered.service
+
+Check the installation
+----------------------
+Make sure NodeRed is correctly installed by reaching the following page from the broswer of your pi :
+::
+ http://localhost:1880.
+
+Install few nodes
+-----------------
+These nodes will be used in Node-RED:
+::
+ cd .node-red/
+ npm install node-red-dashboard
+ npm install node-red-contrib-python3-function
+ npm install node-red-contrib-camerapi
+ npm install node-red-contrib-gpsd
+ npm install node-red-contrib-web-worldmap
+
+Import the last GUI
+-------------------
+
+Import the `lastest version of the GUI `_
+
+Install Mosquitto MQTT
+======================
+
+In order to send and receive from Node-RED:
+::
+ sudo apt-get install mosquitto mosquitto-clients
+
+
+Install mqtt-paho
+=================
+
+In order to send and receive from python:
+::
+ pip3 install paho-mqtt
+
+Install OpenCV
+=================
+
+Use the quick version without virtual env
+https://www.pyimagesearch.com/2019/09/16/install-opencv-4-on-raspberry-pi-4-and-raspbian-buster/
+
+
+Install MorphoCut
+=================
+
+`Installing MorphoCut `_
+
+MorphoCut is packaged on PyPI and can be installed with pip:
+::
+ sudo apt-get install python3-scipy
+ pip3 install -U git+https://github.com/morphocut/morphocut.git@pyrocystis
+
+Finishing the install
+=====================
+
+Make sure to update your Pi
+::
+ sudo apt-get update -y
+ sudo apt-get full-upgrade -y
+
+Reboot your Pi safely
+::
+ sudo reboot now
+
+
+*******************
+Usefull later maybe
+*******************
+
+Download the GitHub repo
+========================
+At this link : https://github.com/tpollina/PlanktonScope/archive/master.zip
+Unzip to a specific location:
+::
+ unzip /home/pi/Downloads/PlanktonScope-master.zip -d /home/pi/
+ mv /home/pi/PlanktonScope-master /home/pi/PlanktonScope
+
+Update node-RED interface
+=========================
+To update the interface, you can just download the lastest .json file:
+::
+ wget -P $HOME/.node-red https://raw.githubusercontent.com/tpollina/PlanktonScope/master/scripts/flows_planktonscope.json
+
+
+Share WiFi via Ethernet
+=======================
+
+At this link : https://www.instructables.com/id/Share-WiFi-With-Ethernet-Port-on-a-Raspberry-Pi/
+