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        "id": "7f885510.6173fc",
        "type": "tab",
        "label": "Flow 1",
        "disabled": false,
        "info": ""
    },
    {
        "id": "955fdac.f54f328",
        "type": "ui_text_input",
        "z": "7f885510.6173fc",
        "name": "sample_ship",
        "label": "Name of the ship (ex : Tara)",
        "tooltip": "",
        "group": "c627ea8d.f886e8",
        "order": 2,
        "width": 0,
        "height": 0,
        "passthru": true,
        "mode": "text",
        "delay": 300,
        "topic": "sample_ship",
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        "y": 140,
        "wires": [
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    {
        "id": "dfb29406.d68148",
        "type": "ui_dropdown",
        "z": "7f885510.6173fc",
        "name": "sample_sampling_gear",
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        "tooltip": "",
        "place": "Select",
        "group": "c627ea8d.f886e8",
        "order": 5,
        "width": 0,
        "height": 0,
        "passthru": true,
        "options": [
            {
                "label": "Plankton net",
                "value": "net",
                "type": "str"
            },
            {
                "label": "Niskin bottle 12L",
                "value": "niskin_12L",
                "type": "str"
            },
            {
                "label": "Niskin bottle 24L",
                "value": "niskin_24L",
                "type": "str"
            }
        ],
        "payload": "",
        "topic": "sample_sampling_gear",
        "x": 190,
        "y": 260,
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        "group": "c627ea8d.f886e8",
        "order": 4,
        "width": 0,
        "height": 0,
        "passthru": true,
        "mode": "text",
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        "type": "ui_text_input",
        "z": "7f885510.6173fc",
        "name": "sample_project",
        "label": "Name of the project (ex : Tara_Pacific)",
        "tooltip": "",
        "group": "c627ea8d.f886e8",
        "order": 1,
        "width": 0,
        "height": 0,
        "passthru": true,
        "mode": "text",
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        "topic": "sample_project",
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        "id": "ff33630c.78f63",
        "type": "ui_date_picker",
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        "name": "object_date",
        "label": "Sample date",
        "group": "106f0e1b.6478a2",
        "order": 1,
        "width": 0,
        "height": 0,
        "passthru": true,
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        "x": 1210,
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        "name": "object_time",
        "label": "Sampling time",
        "tooltip": "",
        "group": "106f0e1b.6478a2",
        "order": 2,
        "width": 0,
        "height": 0,
        "passthru": true,
        "mode": "time",
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        "x": 1210,
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    {
        "id": "eb39c21c.a3fec",
        "type": "ui_text_input",
        "z": "7f885510.6173fc",
        "name": "object_lat",
        "label": "Lattitude (decimal degrees)",
        "tooltip": "",
        "group": "106f0e1b.6478a2",
        "order": 3,
        "width": 0,
        "height": 0,
        "passthru": true,
        "mode": "number",
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        "type": "ui_text_input",
        "z": "7f885510.6173fc",
        "name": "object_lon",
        "label": "Longitude (decimal degrees)",
        "tooltip": "",
        "group": "106f0e1b.6478a2",
        "order": 4,
        "width": 0,
        "height": 0,
        "passthru": true,
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        "x": 1210,
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    },
    {
        "id": "d90c72f2.cf1ca",
        "type": "ui_text_input",
        "z": "7f885510.6173fc",
        "name": "sample_id",
        "label": "Name of the station (ex: OA125)",
        "tooltip": "",
        "group": "c627ea8d.f886e8",
        "order": 3,
        "width": 0,
        "height": 0,
        "passthru": true,
        "mode": "text",
        "delay": 300,
        "topic": "sample_id",
        "x": 150,
        "y": 180,
        "wires": [
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    },
    {
        "id": "3300f426.cc515c",
        "type": "ui_dropdown",
        "z": "7f885510.6173fc",
        "name": "acq_fnumber_objective",
        "label": "f-number M12",
        "tooltip": "",
        "place": "Select option",
        "group": "832434ce.ebe498",
        "order": 1,
        "width": 0,
        "height": 0,
        "passthru": true,
        "options": [
            {
                "label": "f 25mm 1/2\" 5MP IR",
                "value": 25,
                "type": "num"
            },
            {
                "label": "f 16mm 1/2.5\" 5MP IR",
                "value": 16,
                "type": "num"
            },
            {
                "label": "f 12mm 1/2.5\" 5MP IR",
                "value": 12,
                "type": "num"
            },
            {
                "label": "f 8mm 1/2.5\" 5MP IR",
                "value": 8,
                "type": "num"
            },
            {
                "label": "f 6mm 1/2.5\" 5MP IR",
                "value": 6,
                "type": "num"
            }
        ],
        "payload": "",
        "topic": "",
        "x": 1250,
        "y": 100,
        "wires": [
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                "de455648.b432f8",
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    },
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        "id": "72d57e31.59234",
        "type": "ui_template",
        "z": "7f885510.6173fc",
        "group": "832434ce.ebe498",
        "name": "Magnification",
        "order": 2,
        "width": 0,
        "height": 0,
        "format": "<div>\n    Magnification : X\n    <span id=\"obj_magnification\" ng-bind-html=\"msg.payload\">\n    </span>\n</div>",
        "storeOutMessages": true,
        "fwdInMessages": true,
        "templateScope": "local",
        "x": 1790,
        "y": 100,
        "wires": [
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        ]
    },
    {
        "id": "98a4bc0a.f3304",
        "type": "ui_template",
        "z": "7f885510.6173fc",
        "group": "77a6994b.e3efb8",
        "name": "Instrument",
        "order": 1,
        "width": 0,
        "height": 0,
        "format": "<div>\n    Instrument :\n    <span id=\"acq_instrument\">\n    PlanktonScope V2.1\n    </span>\n</div>",
        "storeOutMessages": true,
        "fwdInMessages": true,
        "templateScope": "local",
        "x": 150,
        "y": 540,
        "wires": [
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        ]
    },
    {
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        "type": "ui_template",
        "z": "7f885510.6173fc",
        "group": "77a6994b.e3efb8",
        "name": "Software",
        "order": 2,
        "width": 0,
        "height": 0,
        "format": "<div>\n    Software :\n    <span id=\"acq_software\">\n    Node-RED Dashboard\n    </span>\n</div>",
        "storeOutMessages": true,
        "fwdInMessages": true,
        "templateScope": "local",
        "x": 140,
        "y": 580,
        "wires": [
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        ]
    },
    {
        "id": "1a0a45f1.2cd7da",
        "type": "ui_template",
        "z": "7f885510.6173fc",
        "group": "77a6994b.e3efb8",
        "name": "Camera",
        "order": 3,
        "width": 0,
        "height": 0,
        "format": "<div>\n    Camera :\n    <span id=\"acq_camera_name\">\n    Pi Camera v2.1\n    </span>\n</div>",
        "storeOutMessages": true,
        "fwdInMessages": true,
        "templateScope": "local",
        "x": 140,
        "y": 620,
        "wires": [
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        ]
    },
    {
        "id": "de455648.b432f8",
        "type": "function",
        "z": "7f885510.6173fc",
        "name": "calculate",
        "func": "var acq_fnumber_objective = String(msg.payload);\n\nswitch(acq_fnumber_objective) {\n  case \"25\":\n    magnification = String(' 0.6');\n    process_pixel = String(' 1.86');\n    sug_min = String(' 60');\n    sug_max = String(' 670');\n    flowrate = String(' 3');\n    duration = String(' 3');\n    break;\n  case \"16\":\n    magnification = String(' 0.94');\n    process_pixel = String(' 1.19');\n    sug_min = String(' 40');\n    sug_max = String(' 430');\n    flowrate = String(' 2.4');\n    duration = String(' 3');\n    break;\n  case \"12\":\n    magnification = String(' 1.20');\n    process_pixel = String(' 0.94');\n    sug_min = String(' 30');\n    sug_max = String(' 340');\n    flowrate = String(' 1.25');\n    duration = String(' 3');\n    break;\n  case \"8\":\n    magnification = String(' 1.78');\n    process_pixel = String(' 0.63');\n    sug_min = String(' 20');\n    sug_max = String(' 230');\n    flowrate = String(' 0.42');\n    duration = String(' 3');\n    break;\n  case \"6\":\n    magnification = String(' 2.36');\n    process_pixel = String(' 0.48');\n    sug_min = String(' 15');\n    sug_max = String(' 170');\n    flowrate = String(' 0.32');\n    duration = String(' 3');\n    break;\n}\n\nmsg.payload = magnification.concat(process_pixel, sug_min, sug_max,flowrate,duration);\nreturn msg;",
        "outputs": 1,
        "noerr": 0,
        "x": 1440,
        "y": 100,
        "wires": [
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                "bf51ed75.15f7f",
                "1c966729.d952b9",
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                "578b63e7.8a675c"
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    },
    {
        "id": "f3aa18d.65f0de8",
        "type": "ui_dropdown",
        "z": "7f885510.6173fc",
        "name": "acq_celltype",
        "label": "Thickness flowcell",
        "tooltip": "",
        "place": "Select option",
        "group": "a72a9ec6.bb144",
        "order": 1,
        "width": 0,
        "height": 0,
        "passthru": true,
        "options": [
            {
                "label": "200 μm µ-Slide I Luer",
                "value": 200,
                "type": "num"
            },
            {
                "label": "400 μm µ-Slide I Luer",
                "value": 400,
                "type": "num"
            },
            {
                "label": "600 μm µ-Slide I Luer",
                "value": 600,
                "type": "num"
            },
            {
                "label": "800 μm µ-Slide I Luer",
                "value": 800,
                "type": "num"
            }
        ],
        "payload": "",
        "topic": "acq_celltype",
        "x": 150,
        "y": 340,
        "wires": [
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            ]
        ]
    },
    {
        "id": "45568fe8.67759",
        "type": "ui_numeric",
        "z": "7f885510.6173fc",
        "name": "acq_minimum_mesh",
        "label": "Min fraction size (μm)",
        "tooltip": "",
        "group": "a72a9ec6.bb144",
        "order": 3,
        "width": 0,
        "height": 0,
        "wrap": false,
        "passthru": true,
        "topic": "acq_minimum_mesh",
        "format": "{{value}}",
        "min": 0,
        "max": "300",
        "step": "10",
        "x": 180,
        "y": 420,
        "wires": [
            [
                "5e6e3b80.1068d4"
            ]
        ]
    },
    {
        "id": "918b69e2.7e6e88",
        "type": "ui_numeric",
        "z": "7f885510.6173fc",
        "name": "acq_maximum_mesh",
        "label": "Max fraction size (μm)",
        "tooltip": "",
        "group": "a72a9ec6.bb144",
        "order": 4,
        "width": 0,
        "height": 0,
        "wrap": false,
        "passthru": true,
        "topic": "acq_maximum_mesh",
        "format": "{{value}}",
        "min": "200",
        "max": "2000",
        "step": "100",
        "x": 180,
        "y": 460,
        "wires": [
            [
                "5e6e3b80.1068d4"
            ]
        ]
    },
    {
        "id": "86d762dc.47911",
        "type": "ui_switch",
        "z": "7f885510.6173fc",
        "name": "light_state",
        "label": "Light",
        "tooltip": "",
        "group": "c62ffbd3.787ef8",
        "order": 2,
        "width": 2,
        "height": 1,
        "passthru": true,
        "decouple": "false",
        "topic": "",
        "style": "",
        "onvalue": "true",
        "onvalueType": "bool",
        "onicon": "",
        "oncolor": "",
        "offvalue": "false",
        "offvalueType": "bool",
        "officon": "",
        "offcolor": "",
        "x": 630,
        "y": 480,
        "wires": [
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                "b5a366b4.cb6918"
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        ]
    },
    {
        "id": "b5a366b4.cb6918",
        "type": "exec",
        "z": "7f885510.6173fc",
        "command": "python3.7 $HOME/PlanktonScope/scripts/light.py",
        "addpay": true,
        "append": "",
        "useSpawn": "false",
        "timer": "",
        "oldrc": false,
        "name": "light.py",
        "x": 960,
        "y": 480,
        "wires": [
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            [],
            []
        ]
    },
    {
        "id": "5ea28a70.42ae14",
        "type": "ui_button",
        "z": "7f885510.6173fc",
        "name": "up",
        "group": "c62ffbd3.787ef8",
        "order": 4,
        "width": 1,
        "height": 1,
        "passthru": false,
        "label": "",
        "tooltip": "",
        "color": "",
        "bgcolor": "",
        "icon": "arrow_upwards",
        "payload": "up",
        "payloadType": "str",
        "topic": "up",
        "x": 650,
        "y": 580,
        "wires": [
            [
                "523fdeaa.50c6c"
            ]
        ]
    },
    {
        "id": "27f16831.dde938",
        "type": "ui_button",
        "z": "7f885510.6173fc",
        "name": "down",
        "group": "c62ffbd3.787ef8",
        "order": 6,
        "width": 1,
        "height": 1,
        "passthru": true,
        "label": "",
        "tooltip": "",
        "color": "",
        "bgcolor": "",
        "icon": "arrow_downward",
        "payload": "down",
        "payloadType": "str",
        "topic": "down",
        "x": 650,
        "y": 660,
        "wires": [
            [
                "523fdeaa.50c6c"
            ]
        ]
    },
    {
        "id": "855e9d96.ab869",
        "type": "ui_text_input",
        "z": "7f885510.6173fc",
        "name": "nb_step",
        "label": "Number of step",
        "tooltip": "",
        "group": "c62ffbd3.787ef8",
        "order": 5,
        "width": 3,
        "height": 1,
        "passthru": false,
        "mode": "number",
        "delay": 300,
        "topic": "nb_step",
        "x": 640,
        "y": 620,
        "wires": [
            [
                "523fdeaa.50c6c"
            ]
        ]
    },
    {
        "id": "b110542b.5de4f8",
        "type": "ui_button",
        "z": "7f885510.6173fc",
        "name": "kill_focus",
        "group": "c62ffbd3.787ef8",
        "order": 7,
        "width": 3,
        "height": 1,
        "passthru": false,
        "label": "Cancel focus",
        "tooltip": "",
        "color": "#AD1625",
        "bgcolor": "#333333",
        "icon": "pause",
        "payload": "",
        "payloadType": "str",
        "topic": "",
        "x": 640,
        "y": 720,
        "wires": [
            [
                "d9dea2bc.47097"
            ]
        ]
    },
    {
        "id": "523fdeaa.50c6c",
        "type": "function",
        "z": "7f885510.6173fc",
        "name": "focus",
        "func": "var lastinput = context.get(\"lastinput\") || \"\";\n\nif(msg.topic === \"nb_step\"){\n    lastinput = msg.payload;\n    context.set(\"lastinput\",lastinput);\n}\nif(msg.topic === \"up\"){\n\n    nb_step = String(lastinput);\n\n    orientation = \"up\";\n\n    msg.payload = nb_step.concat(' ', orientation);\n    return msg;\n}\nif(msg.topic === \"down\"){\n    \n    nb_step = String(lastinput);\n\n    orientation = \"down\";\n    msg.payload = nb_step.concat(' ', orientation);\n\n    return msg;\n}\n\n",
        "outputs": 1,
        "noerr": 0,
        "x": 810,
        "y": 620,
        "wires": [
            [
                "ada728bd.8e7818"
            ]
        ],
        "info": "### Focusing\n##### focus.py `nb_step` `orientation`\n\n- `nb_step` : **integer** (from 1 to 100000) - number of step to perform by the stage (about 31um/step)\n- `orientation` : **string** - orientation of the focus either `up` or `down`\n\nExample:\n\n    python3.7 $HOME/PlanktonScope/scripts/focus.py 650 up\n"
    },
    {
        "id": "ada728bd.8e7818",
        "type": "exec",
        "z": "7f885510.6173fc",
        "command": "python3.7 $HOME/PlanktonScope/scripts/focus.py",
        "addpay": true,
        "append": "",
        "useSpawn": "false",
        "timer": "",
        "oldrc": false,
        "name": "Focus.py",
        "x": 960,
        "y": 620,
        "wires": [
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            [],
            []
        ]
    },
    {
        "id": "d9dea2bc.47097",
        "type": "exec",
        "z": "7f885510.6173fc",
        "command": "bash $HOME/PlanktonScope/scripts/killer.sh focus.py && bash $HOME/PlanktonScope/scripts/killer.sh focus.py",
        "addpay": false,
        "append": "",
        "useSpawn": "false",
        "timer": "",
        "oldrc": false,
        "name": "Kill Focus",
        "x": 960,
        "y": 720,
        "wires": [
            [],
            [],
            []
        ]
    },
    {
        "id": "6bf10b4c.c83c84",
        "type": "ui_button",
        "z": "7f885510.6173fc",
        "name": "start",
        "group": "c62ffbd3.787ef8",
        "order": 9,
        "width": 6,
        "height": 1,
        "passthru": false,
        "label": "Start Acquisition",
        "tooltip": "",
        "color": "",
        "bgcolor": "",
        "icon": "play_circle_fill",
        "payload": "",
        "payloadType": "str",
        "topic": "start",
        "x": 650,
        "y": 960,
        "wires": [
            [
                "2d01ecd6.b00d34"
            ]
        ]
    },
    {
        "id": "2c9498e7.bf0c38",
        "type": "ui_button",
        "z": "7f885510.6173fc",
        "name": "stop",
        "group": "c62ffbd3.787ef8",
        "order": 10,
        "width": 6,
        "height": 1,
        "passthru": false,
        "label": "Cancel Acquisition",
        "tooltip": "",
        "color": "#AD1625",
        "bgcolor": "#333333",
        "icon": "pause_circle_filled",
        "payload": "",
        "payloadType": "str",
        "topic": "stop",
        "x": 650,
        "y": 1000,
        "wires": [
            [
                "501e654e.6ca29c"
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        ]
    },
    {
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        "type": "function",
        "z": "7f885510.6173fc",
        "d": true,
        "name": "Store",
        "func": "var lastinput = context.get(\"lastinput\") || \"\";\n\nif(msg.topic === \"acq_fluid_volume_imaged\"){\n    lastinput = msg.payload;\n    context.set(\"acq_fluid_volume_imaged\",acq_fluid_volume_imaged);\n}\n\nif(msg.topic === \"sample_project\"){\n    lastinput = msg.payload;\n    context.set(\"sample_project\",sample_project);\n}\n\nif(msg.topic === \"sample_id\"){\n    lastinput = msg.payload;\n    context.set(\"sample_id\",sample_id);\n}\n\n\nmsg.payload = nb_step.concat(' ', orientation);\nreturn msg;\n\n\n",
        "outputs": 1,
        "noerr": 0,
        "x": 2230,
        "y": 400,
        "wires": [
            []
        ]
    },
    {
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        "name": "Pi Camera settings",
        "order": 7,
        "width": 0,
        "height": 0,
        "format": "<button class=\"md-raised md-button md-ink-ripple\" type=\"button\" onclick=\"window.location.href = 'http://127.0.0.1/html/';\">Pi Camera settings</button>\n",
        "storeOutMessages": true,
        "fwdInMessages": true,
        "templateScope": "local",
        "x": 1230,
        "y": 320,
        "wires": [
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    {
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        "name": "get magnification",
        "func": "var array = String(msg.payload);\n\nvar items = array.split(' ');\n\nmsg.payload = items[1];\n\nreturn msg;",
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        "x": 1610,
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        "width": 0,
        "height": 0,
        "format": "<div>\n    Pixel resolution :\n    <span id=\"process_pixel\" ng-bind-html=\"msg.payload\"></span>\n    μm\n</div>",
        "storeOutMessages": true,
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        "templateScope": "local",
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        "name": "get process_pixel",
        "func": "var array = String(msg.payload);\n\nvar items = array.split(' ');\n\nmsg.payload = items[2];\n\nreturn msg;",
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        "noerr": 0,
        "x": 1610,
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        "wires": [
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        "group": "832434ce.ebe498",
        "name": "min_size",
        "order": 4,
        "width": 0,
        "height": 0,
        "format": "<div>\n    Smallest cells to explore :\n    <span id=\"min_size\" ng-bind-html=\"msg.payload\"></span>\n    μm\n</div>",
        "storeOutMessages": true,
        "fwdInMessages": true,
        "templateScope": "local",
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        "noerr": 0,
        "x": 1590,
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        "wires": [
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        "group": "832434ce.ebe498",
        "name": "max_size",
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        "width": 0,
        "height": 0,
        "format": "<div>\n    Biggest cells to explore :\n    <span id=\"max_size\" ng-bind-html=\"msg.payload\"></span>\n    μm\n</div>",
        "storeOutMessages": true,
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        "templateScope": "local",
        "x": 1780,
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        "name": "get max size",
        "func": "var array = String(msg.payload);\n\nvar items = array.split(' ');\n\nmsg.payload = items[4];\n\nreturn msg;",
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        "noerr": 0,
        "x": 1590,
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        "wires": [
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        "group": "832434ce.ebe498",
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        "order": 6,
        "width": 0,
        "height": 0,
        "format": "<div>\n    Flowrate :\n    <span id=\"max_size\" ng-bind-html=\"msg.payload\"></span>\n    ml/min\n</div>",
        "storeOutMessages": true,
        "fwdInMessages": true,
        "templateScope": "local",
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        "name": "get flowrate",
        "func": "var array = String(msg.payload);\n\nvar items = array.split(' ');\n\nmsg.payload = items[5];\nreturn msg;",
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        "noerr": 0,
        "x": 1590,
        "y": 260,
        "wires": [
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        "z": "7f885510.6173fc",
        "group": "c62ffbd3.787ef8",
        "name": "Stream Pi Camera",
        "order": 1,
        "width": 0,
        "height": 0,
        "format": "<center><iframe id=\"inlineFrameExample\"\n    title=\"Inline Frame Example\"\n    height=\"384\"\n    width=\"512\"\n    frameborder=\"0\"\n    src=\"http://127.0.0.1/html/min.php\">\n</iframe></center>",
        "storeOutMessages": true,
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        "templateScope": "local",
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    {
        "id": "2d01ecd6.b00d34",
        "type": "function",
        "z": "7f885510.6173fc",
        "name": "Image",
        "func": "var in_path = context.get(\"in_path\") || 0; //get from context or default to 0\nvar sample_project = context.get(\"sample_project\") || 0; //get from context or default to 0\nvar sample_id = context.get(\"sample_id\") || 0; //get from context or default to 0\nvar acq_id = context.get(\"acq_id\") || 0; //get from context or default to 0\nvar acq_fnumber_objective = String(msg.payload);\n\nswitch(acq_fnumber_objective) {\n  case \"25\":\n    flowrate = String(' 3');\n    break;\n  case \"16\":\n    flowrate = String(' 2.4');\n    break;\n  case \"12\":\n    flowrate = String(' 1.25');\n    break;\n  case \"8\":\n    flowrate = String(' 0.42');\n    break;\n  case \"6\":\n    flowrate = String(' 0.32');\n    break;\n}\n\nswitch (msg.topic){\n    case \"in_path\":\n        in_path = msg.payload; //payload NOT paydoad  :)\n        context.set(\"in_path\", in_path); //store in context for next time \n        break;\n    case \"sample_project\":\n        sample_project = msg.payload; //payload NOT paydoad  :)\n        context.set(\"sample_project\", sample_project); //store in context for next time \n        break;\n    case \"sample_id\":\n        sample_id = msg.payload; //payload NOT paydoad  :)\n        context.set(\"sample_id\", sample_id); //store in context for next time \n        break;\n    case \"acq_id\":\n        acq_id = msg.payload; //payload NOT paydoad  :)\n        context.set(\"acq_id\", acq_id); //store in context for next time \n        break;\n}\nif(msg.topic === \"start\"){\n    \n    in_path = String(in_path);\n    sample_project = String(sample_project);\n    sample_id = String(sample_id);\n    acq_id = String(acq_id);\n\n    msg.payload = [in_path, sample_project, sample_id, acq_id, flowrate].filter(x => typeof x === 'string' && x.length > 0).join(\" \");\n    return msg;\n}",
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        "noerr": 0,
        "x": 810,
        "y": 880,
        "wires": [
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                "ac43bec2.d6696",
                "fd5146e4.600cc8"
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        "info": "### Image\n##### image.py `in_path` `sample_project` `sample_id` `acq_id` `volume` `flowrate`\n\n- `in_path` : **string** - directory to store acquisitions **the path has to end with /**\n- `sample_project` : **string**\n- `sample_id` : **string**\n- `acq_id` : **string**\n- `volume` : **integer**\n- `flowrate` : **float**\n\nExample:\n\n    python3.7 $HOME/PlanktonScope/scripts/image.py $HOME/PlanktonScope/Acquisitions/ tara_pacific station_125 exp_1 24 3.2\n    "
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        "id": "c84f1718.4af6b8",
        "type": "ui_switch",
        "z": "7f885510.6173fc",
        "name": "fan_state",
        "label": "Fan",
        "tooltip": "",
        "group": "c62ffbd3.787ef8",
        "order": 3,
        "width": 2,
        "height": 1,
        "passthru": true,
        "decouple": "false",
        "topic": "",
        "style": "",
        "onvalue": "true",
        "onvalueType": "bool",
        "onicon": "",
        "oncolor": "",
        "offvalue": "false",
        "offvalueType": "bool",
        "officon": "",
        "offcolor": "",
        "x": 640,
        "y": 540,
        "wires": [
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        ]
    },
    {
        "id": "dec2b84a.6faa18",
        "type": "exec",
        "z": "7f885510.6173fc",
        "command": "python3.7 $HOME/PlanktonScope/scripts/fan.py",
        "addpay": true,
        "append": "",
        "useSpawn": "false",
        "timer": "",
        "oldrc": false,
        "name": "fan.py",
        "x": 950,
        "y": 540,
        "wires": [
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            [],
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    {
        "id": "7923e634.673cd8",
        "type": "ui_text_input",
        "z": "7f885510.6173fc",
        "name": "in_path",
        "label": "Directory (ex : /home/pi/Desktop/)",
        "tooltip": "",
        "group": "c62ffbd3.787ef8",
        "order": 8,
        "width": "12",
        "height": "1",
        "passthru": true,
        "mode": "text",
        "delay": 300,
        "topic": "in_path",
        "x": 640,
        "y": 880,
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    {
        "id": "477dc1bd.c3de8",
        "type": "ui_text_input",
        "z": "7f885510.6173fc",
        "name": "acq_id",
        "label": "Acquisition ID (ex : experience_1)",
        "tooltip": "",
        "group": "c62ffbd3.787ef8",
        "order": 8,
        "width": "12",
        "height": "1",
        "passthru": true,
        "mode": "text",
        "delay": 300,
        "topic": "acq_id",
        "x": 650,
        "y": 920,
        "wires": [
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    {
        "id": "1cdfba79.2455b6",
        "type": "exec",
        "z": "7f885510.6173fc",
        "command": "python3.7 $HOME/PlanktonScope/scripts/image.py",
        "addpay": true,
        "append": "",
        "useSpawn": "false",
        "timer": "",
        "oldrc": false,
        "name": "image.py",
        "x": 1120,
        "y": 800,
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        "type": "exec",
        "z": "7f885510.6173fc",
        "command": "bash $HOME/RPi_Cam_Web_Interface/stop.sh",
        "addpay": false,
        "append": "",
        "useSpawn": "false",
        "timer": "",
        "oldrc": false,
        "name": "Kill RPi Web Interface",
        "x": 1160,
        "y": 880,
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        "type": "delay",
        "z": "7f885510.6173fc",
        "name": "",
        "pauseType": "delay",
        "timeout": "5",
        "timeoutUnits": "seconds",
        "rate": "1",
        "nbRateUnits": "1",
        "rateUnits": "second",
        "randomFirst": "1",
        "randomLast": "5",
        "randomUnits": "seconds",
        "drop": false,
        "x": 960,
        "y": 820,
        "wires": [
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        "z": "7f885510.6173fc",
        "command": "bash $HOME/RPi_Cam_Web_Interface/start.sh",
        "addpay": true,
        "append": "",
        "useSpawn": "false",
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        "oldrc": false,
        "name": "Restart RPi Web Interface",
        "x": 1170,
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        "type": "delay",
        "z": "7f885510.6173fc",
        "name": "",
        "pauseType": "delay",
        "timeout": "2",
        "timeoutUnits": "seconds",
        "rate": "1",
        "nbRateUnits": "1",
        "rateUnits": "second",
        "randomFirst": "1",
        "randomLast": "5",
        "randomUnits": "seconds",
        "drop": false,
        "x": 960,
        "y": 880,
        "wires": [
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        "z": "7f885510.6173fc",
        "name": "wait",
        "func": "var acq_fnumber_objective = String(msg.payload);\n\nswitch(acq_fnumber_objective) {\n  case \"25\":\n    duration = String('500');\n    break;\n  case \"16\":\n    duration = String('620');\n    break;\n  case \"12\":\n    duration = String('1170');\n    break;\n  case \"8\":\n    duration = String('3450');\n    break;\n  case \"6\":\n    duration = String('4520');\n    break;\n}\n\nmsg.payload = duration;\nreturn msg;",
        "outputs": 1,
        "noerr": 0,
        "x": 970,
        "y": 940,
        "wires": [
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                "12df6d06.bfe9a3"
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    {
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        "type": "debug",
        "z": "7f885510.6173fc",
        "name": "",
        "active": true,
        "tosidebar": true,
        "console": false,
        "tostatus": false,
        "complete": "false",
        "x": 1430,
        "y": 900,
        "wires": []
    },
    {
        "id": "615a8890.e9eee8",
        "type": "exec",
        "z": "7f885510.6173fc",
        "command": "bash $HOME/PlanktonScope/scripts/kill_image.sh",
        "addpay": true,
        "append": "",
        "useSpawn": "false",
        "timer": "",
        "oldrc": false,
        "name": "Kill Image",
        "x": 1120,
        "y": 1020,
        "wires": [
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                "54727b23.4a9c34"
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    {
        "id": "501e654e.6ca29c",
        "type": "function",
        "z": "7f885510.6173fc",
        "name": "Image",
        "func": "var in_path = context.get(\"in_path\") || 0; //get from context or default to 0\nvar sample_project = context.get(\"sample_project\") || 0; //get from context or default to 0\nvar sample_id = context.get(\"sample_id\") || 0; //get from context or default to 0\nvar acq_id = context.get(\"acq_id\") || 0; //get from context or default to 0\n\nswitch (msg.topic){\n    case \"in_path\":\n        in_path = msg.payload; //payload NOT paydoad  :)\n        context.set(\"in_path\", in_path); //store in context for next time \n        break;\n    case \"sample_project\":\n        sample_project = msg.payload; //payload NOT paydoad  :)\n        context.set(\"sample_project\", sample_project); //store in context for next time \n        break;\n    case \"sample_id\":\n        sample_id = msg.payload; //payload NOT paydoad  :)\n        context.set(\"sample_id\", sample_id); //store in context for next time \n        break;\n    case \"acq_id\":\n        acq_id = msg.payload; //payload NOT paydoad  :)\n        context.set(\"acq_id\", acq_id); //store in context for next time \n        break;\n}\nif(msg.topic === \"stop\"){\n    \n    in_path = String(in_path);\n    sample_project = String(sample_project);\n    sample_id = String(sample_id);\n    acq_id = String(acq_id);\n\n    msg.payload = [in_path, sample_project, sample_id, acq_id].filter(x => typeof x === 'string' && x.length > 0).join(\" \");\n    return msg;\n}",
        "outputs": 1,
        "noerr": 0,
        "x": 970,
        "y": 1020,
        "wires": [
            [
                "615a8890.e9eee8"
            ]
        ],
        "info": "### Image\n##### image.py `in_path` `sample_project` `sample_id` `acq_id` `volume` `flowrate`\n\n- `in_path` : **string** - directory to store acquisitions **the path has to end with /**\n- `sample_project` : **string**\n- `sample_id` : **string**\n- `acq_id` : **string**\n- `volume` : **integer**\n- `flowrate` : **float**\n\nExample:\n\n    python3.7 $HOME/PlanktonScope/scripts/image.py $HOME/PlanktonScope/Acquisitions/ tara_pacific station_125 exp_1 24 3.2\n    "
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    {
        "id": "c627ea8d.f886e8",
        "type": "ui_group",
        "z": "",
        "name": "General",
        "tab": "6b01f851.598028",
        "order": 1,
        "disp": true,
        "width": 6,
        "collapse": false
    },
    {
        "id": "106f0e1b.6478a2",
        "type": "ui_group",
        "z": "",
        "name": "Spatio Temporal",
        "tab": "6b01f851.598028",
        "order": 5,
        "disp": true,
        "width": "6",
        "collapse": false
    },
    {
        "id": "832434ce.ebe498",
        "type": "ui_group",
        "z": "",
        "name": "Optic Settings",
        "tab": "6b01f851.598028",
        "order": 3,
        "disp": true,
        "width": "6",
        "collapse": false
    },
    {
        "id": "77a6994b.e3efb8",
        "type": "ui_group",
        "z": "",
        "name": "General",
        "tab": "6b01f851.598028",
        "order": 6,
        "disp": true,
        "width": 6,
        "collapse": false
    },
    {
        "id": "a72a9ec6.bb144",
        "type": "ui_group",
        "z": "",
        "name": "Fluidic settings",
        "tab": "6b01f851.598028",
        "order": 4,
        "disp": true,
        "width": "6",
        "collapse": false
    },
    {
        "id": "c62ffbd3.787ef8",
        "type": "ui_group",
        "z": "",
        "name": "Preview",
        "tab": "6b01f851.598028",
        "order": 2,
        "disp": true,
        "width": 12,
        "collapse": false
    },
    {
        "id": "6b01f851.598028",
        "type": "ui_tab",
        "z": "",
        "name": "PlanktonScope GUI v2.1",
        "icon": "date_range",
        "order": 1,
        "disabled": false,
        "hidden": false
    }
]