Filamentous Organisms and Protozoa
The main scan was performed on ??? using the
protocol ??? and camera setup
???.
The sample volume VSample = ??? uL
divided by the size of the coverslip Acoverslip =
??? mm x ??? mm
yield an observed height of
hobserved = VSample / Acoverslip =
um.
Multipilcation with the size of the
the field of view AFoV = ??? um x
??? um yield
an observed Volume of
Vobserved = hobserved * AFoV = ??? uL per FoV.
The volume of organisms per FoV is multiplied with the
dilution Factor Fdilution = ???
and devided by Vobserved to calculate the abundance per uL.
Fmultiplication = Fdilution * 1 uL / Vobserved = ???
Filamentous Organisms and Protozoa Table
|
organism
|
abundance [ug/uL] or [1/uL]
|
standard deviation [%]
|
Bacteria Scan
The bacteria scan has been performed on ???.
The sample volume VSample = ??? uL
divided by the size of the coverslip Acoverslip =
??? mm x ??? mm
yield an observed height of
hobserved = VSample / Acoverslip =
um.
Multipilcation with the size of the
the field of view AFoV = ??? um x
??? um yield
an observed Volume of
Vobserved = hobserved * AFoV = ??? uL per FoV.
The volume of organisms per FoV is multiplied with the
dilution Factor Fdilution = ???
and devided by Vobserved to calculate the abundance per uL.
Fmultiplication = Fdilution * 1 uL / Vobserved = ???
Bacteria Table
|
type of Bacteria
|
count per FoV
|
area [um²] per FoV
|
number per uL +- [%]
|
~ ug / uL +- [%]
|
Bacterial to Fungal Biomass
The Bacterial mBacteria = ???
to Fungal Biomass mFungi = ???.
mFungi / mBacteria = ???
Nematode Scan
The namatode scan has been performed on ???
using the protocol ??? and camera setup
???.
To calculate the abundance of nematodes per cubic centimeter of sample the dilution Factor Fdilution =
??? is divided by the sample size Vsample =
??? uL.
The multiplication factor for the nematode scan is:
Fnematode = Fdilution / Vsample = ???
Nematode Table
|
functional group
|
count
|
number per cm³
|