Commit graph

21 commits

Author SHA1 Message Date
Sebastian Wendel 5cc786bab1
added python project config and reordered folder structure 2022-11-11 17:31:21 +01:00
Romain Bazile 7ef2cd7eab Various comment updates and small sourcery suggestions 2021-12-01 13:33:40 +01:00
Romain Bazile f2e41dc8b6 segmenter: fix missing parameters issue to segment_all call 2021-11-19 13:32:31 +01:00
Romain Bazile 24e28d88ff segmenter: fix typo in process_pixel 2021-10-29 13:49:50 +02:00
Romain Bazile ec43f11f98 segmenter: add process_id 2021-10-18 14:00:23 +02:00
Romain Bazile 1cf9874391 better manage a segmenter failure to start and kill the process 2021-09-06 18:58:23 +02:00
Romain Bazile 1fa40167d6 segmenter: fix bug when less than 20 images are segmented 2021-09-06 18:56:17 +02:00
Romain Bazile f3e6d90a4d segmenter:retrieve initial size data from metadata.json 2021-09-06 18:50:01 +02:00
Romain Bazile f316796e99 Replace all references to PlanktoNScope by PlanktoScope 2021-07-01 15:55:56 +02:00
Romain Bazile 787db1431c segmenter: add metadata regarding operations
(cherry picked from commit 625f754cd531806742327be920accc9ccf0e5f03)
2021-06-18 11:27:07 +02:00
Romain Bazile 8436ac2926 segmenter: fix ecotaxa export again
(cherry picked from commit 253408b5a8156171f5853ed1420f63ebcac0dc7b)
2021-06-18 11:27:03 +02:00
Romain Bazile 5a50bdf23a segmenter: fix ecotaxa message
(cherry picked from commit b652646682e914d66a25e03ac8c348b4234284c7)
2021-06-18 11:26:38 +02:00
Romain Bazile e18d9835ad segmenter: replace adaptative threshold by simple threshold in pipe
(cherry picked from commit f6482fcca9abc0f7e027890a57175559a179d060)
2021-06-18 11:25:46 +02:00
Romain Bazile 5c005ed619 segmenter: fix ecotaxa output bug
(cherry picked from commit af978d7da07f06923d038e750512b7a07c3b3fd0)
2021-06-18 11:25:37 +02:00
Romain Bazile ef59fc4ee1 segmenter: add contour export
(cherry picked from commit 9329cbf8c9fd6a2e3fd5473896a8d1902acfe627)
2021-06-18 11:25:29 +02:00
Romain Bazile 43f01fa893 segmenter: fix median bug calculation
(cherry picked from commit c5f5745d110a3e88fca638f2051413f656115f74)
2021-06-18 11:25:11 +02:00
Romain Bazile 4dca53e2e4 segmenter: save a bigger area than needed
(cherry picked from commit b1d0c4988e80eef2cc3c83618bc62787aa72c6df)
2021-06-18 11:25:07 +02:00
Romain Bazile 396c5623e9 segmenter: activate option to keep debug images
(cherry picked from commit 23e023d6c51a89992e0332aef843e59a180d0fac)
2021-06-18 11:24:59 +02:00
Romain Bazile 8732f8729f segmenter: don't push to pipe if the pipe if full
(cherry picked from commit 1c5a94e605f7ab52efc6fb2b2fdeefdf2c4ab2e3)
2021-06-18 11:24:55 +02:00
Romain Bazile 36eccd43f2 segmenter: ecotaxa export, check that there are objects to export
(cherry picked from commit 31b8c83aa6f0db59c64a62f4caf73cf3974da4f6)
2021-06-18 11:24:51 +02:00
Romain Bazile fedb4a0f09 segmenter: working again!
(cherry picked from commit 6e0358ede1fd9dc302f962b08e4aa73420b296da)
2021-06-18 11:23:07 +02:00